Cargando…

Dr. PIAS: an integrative system for assessing the druggability of protein-protein interactions

BACKGROUND: The amount of data on protein-protein interactions (PPIs) available in public databases and in the literature has rapidly expanded in recent years. PPI data can provide useful information for researchers in pharmacology and medicine as well as those in interactome studies. There is urgen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Sugaya, Nobuyoshi, Furuya, Toshio
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2011
Materias:	Database
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3228542/ https://www.ncbi.nlm.nih.gov/pubmed/21303559 http://dx.doi.org/10.1186/1471-2105-12-50

Ejemplares similares

Dr. PIAS 2.0: an update of a database of predicted druggable protein–protein interactions
por: Sugaya, Nobuyoshi, et al.
Publicado: (2012)

Assessing the druggability of protein-protein interactions by a supervised machine-learning method
por: Sugaya, Nobuyoshi, et al.
Publicado: (2009)

Pharos: Collating protein information to shed light on the druggable genome
por: Nguyen, Dac-Trung, et al.
Publicado: (2017)

SALMONELLABASE - An online database of druggable targets of Salmonella species
por: Pushpa, Ophilia Benedict, et al.
Publicado: (2012)

MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions
por: Hayashi, Takanori, et al.
Publicado: (2018)

PARPs database: A LIMS systems for protein-protein interaction data mining or laboratory information management system
por: Droit, Arnaud, et al.
Publicado: (2007)

IntNetDB v1.0: an integrated protein-protein interaction network database generated by a probabilistic model
por: Xia, Kai, et al.
Publicado: (2006)

A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila
por: Pacifico, Svetlana, et al.
Publicado: (2006)

Columba: an integrated database of proteins, structures, and annotations
por: Trißl, Silke, et al.
Publicado: (2005)

RINGdb: An integrated database for G protein-coupled receptors and regulators of G protein signaling
por: Fang, Yu-Ching, et al.
Publicado: (2006)

PlaPPISite: a comprehensive resource for plant protein-protein interaction sites
por: Yang, Xiaodi, et al.
Publicado: (2020)

A database for G proteins and their interaction with GPCRs
por: Elefsinioti, Antigoni L, et al.
Publicado: (2004)

PRD: A protein–RNA interaction database
por: Fujimori, Shigeo, et al.
Publicado: (2012)

STRING v10: protein–protein interaction networks, integrated over the tree of life
por: Szklarczyk, Damian, et al.
Publicado: (2014)

Structure-based assessment and druggability classification of protein–protein interaction sites
por: Alzyoud, Lara, et al.
Publicado: (2022)

MannDB – A microbial database of automated protein sequence analyses and evidence integration for protein characterization
por: Zhou, Carol L Ecale, et al.
Publicado: (2006)

InterMitoBase: An annotated database and analysis platform of protein-protein interactions for human mitochondria
por: Gu, Zuguang, et al.
Publicado: (2011)

CAPIH: A Web interface for comparative analyses and visualization of host-HIV protein-protein interactions
por: Lin, Fan-Kai, et al.
Publicado: (2009)

AtPIN: Arabidopsis thaliana Protein Interaction Network
por: Brandão, Marcelo M, et al.
Publicado: (2009)

dbOGAP - An Integrated Bioinformatics Resource for Protein O-GlcNAcylation
por: Wang, Jinlian, et al.
Publicado: (2011)

A protein domain interaction interface database: InterPare
por: Gong, Sungsam, et al.
Publicado: (2005)

CLIPdb: a CLIP-seq database for protein-RNA interactions
por: Yang, Yu-Cheng T, et al.
Publicado: (2015)

DroID: the Drosophila Interactions Database, a comprehensive resource for annotated gene and protein interactions
por: Yu, Jingkai, et al.
Publicado: (2008)

Molecular Interaction Search Tool (MIST): an integrated resource for mining gene and protein interaction data
por: Hu, Yanhui, et al.
Publicado: (2018)

iHypoxia: An Integrative Database of Protein Expression Dynamics in Response to Hypoxia in Animals
por: Liu, Ze-Xian, et al.
Publicado: (2023)

dbMPIKT: a database of kinetic and thermodynamic mutant protein interactions
por: Liu, Quanya, et al.
Publicado: (2018)

Is NMR Fragment Screening Fine-Tuned to Assess Druggability of Protein–Protein Interactions?
por: Dias, David M., et al.
Publicado: (2013)

SCOWLP update: 3D classification of protein-protein, -peptide, -saccharide and -nucleic acid interactions, and structure-based binding inferences across folds
por: Teyra, Joan, et al.
Publicado: (2011)

DLiP-PPI library: An integrated chemical database of small-to-medium-sized molecules targeting protein–protein interactions
por: Ikeda, Kazuyoshi, et al.
Publicado: (2023)

GExplore: a web server for integrated queries of protein domains, gene expression and mutant phenotypes
por: Hutter, Harald, et al.
Publicado: (2009)

DWARF – a data warehouse system for analyzing protein families
por: Fischer, Markus, et al.
Publicado: (2006)

SpirPro: A Spirulina proteome database and web-based tools for the analysis of protein-protein interactions at the metabolic level in Spirulina (Arthrospira) platensis C1
por: Senachak, Jittisak, et al.
Publicado: (2015)

An integrated system for genetic analysis
por: Fiddy, Simon, et al.
Publicado: (2006)

GIANT: pattern analysis of molecular interactions in 3D structures of protein–small ligand complexes
por: Kasahara, Kota, et al.
Publicado: (2014)

HAPPI-2: a Comprehensive and High-quality Map of Human Annotated and Predicted Protein Interactions
por: Chen, Jake Y., et al.
Publicado: (2017)

DOMMINO 2.0: integrating structurally resolved protein-, RNA-, and DNA-mediated macromolecular interactions
por: Kuang, Xingyan, et al.
Publicado: (2016)

The representation of protein complexes in the Protein Ontology (PRO)
por: Bult, Carol J, et al.
Publicado: (2011)

ImmTree: Database of evolutionary relationships of genes and proteins in the human immune system
por: Ortutay, Csaba, et al.
Publicado: (2007)

ChiTaRS 5.0: the comprehensive database of chimeric transcripts matched with druggable fusions and 3D chromatin maps
por: Balamurali, Deepak, et al.
Publicado: (2020)

iPPI-DB: an online database of modulators of protein–protein interactions
por: Labbé, Céline M., et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_udsfplmrgf96rn85ddf7u4u39m