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Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data

We present MINEMO (Minimal Information for Neural ElectroMagnetic Ontologies), a checklist for the description of event-related potentials (ERP) studies. MINEMO extends MINI (Minimal Information for Neuroscience Investigations)to the ERP domain. Checklist terms are explicated in NEMO, a formal ontol...

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Autores principales: Frishkoff, Gwen, Sydes, Jason, Mueller, Kurt, Frank, Robert, Curran, Tim, Connolly, John, Kilborn, Kerry, Molfese, Dennis, Perfetti, Charles, Malony, Allen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3235514/
https://www.ncbi.nlm.nih.gov/pubmed/22180824
http://dx.doi.org/10.4056/sigs.2025347
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author Frishkoff, Gwen
Sydes, Jason
Mueller, Kurt
Frank, Robert
Curran, Tim
Connolly, John
Kilborn, Kerry
Molfese, Dennis
Perfetti, Charles
Malony, Allen
author_facet Frishkoff, Gwen
Sydes, Jason
Mueller, Kurt
Frank, Robert
Curran, Tim
Connolly, John
Kilborn, Kerry
Molfese, Dennis
Perfetti, Charles
Malony, Allen
author_sort Frishkoff, Gwen
collection PubMed
description We present MINEMO (Minimal Information for Neural ElectroMagnetic Ontologies), a checklist for the description of event-related potentials (ERP) studies. MINEMO extends MINI (Minimal Information for Neuroscience Investigations)to the ERP domain. Checklist terms are explicated in NEMO, a formal ontology that is designed to support ERP data sharing and integration. MINEMO is also linked to an ERP database and web application (the NEMO portal). Users upload their data and enter MINEMO information through the portal. The database then stores these entries in RDF (Resource Description Framework), along with summary metrics, i.e., spatial and temporal metadata. Together these spatial, temporal, and functional metadata provide a complete description of ERP data and the context in which these data were acquired. The RDF files then serve as inputs to ontology-based labeling and meta-analysis. Our ultimate goal is to represent ERPs using a rich semantic structure, so results can be queried at multiple levels, to stimulate novel hypotheses and to promote a high-level, integrative account of ERP results across diverse study methods and paradigms.
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spelling pubmed-32355142011-12-16 Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data Frishkoff, Gwen Sydes, Jason Mueller, Kurt Frank, Robert Curran, Tim Connolly, John Kilborn, Kerry Molfese, Dennis Perfetti, Charles Malony, Allen Stand Genomic Sci Community Dialog We present MINEMO (Minimal Information for Neural ElectroMagnetic Ontologies), a checklist for the description of event-related potentials (ERP) studies. MINEMO extends MINI (Minimal Information for Neuroscience Investigations)to the ERP domain. Checklist terms are explicated in NEMO, a formal ontology that is designed to support ERP data sharing and integration. MINEMO is also linked to an ERP database and web application (the NEMO portal). Users upload their data and enter MINEMO information through the portal. The database then stores these entries in RDF (Resource Description Framework), along with summary metrics, i.e., spatial and temporal metadata. Together these spatial, temporal, and functional metadata provide a complete description of ERP data and the context in which these data were acquired. The RDF files then serve as inputs to ontology-based labeling and meta-analysis. Our ultimate goal is to represent ERPs using a rich semantic structure, so results can be queried at multiple levels, to stimulate novel hypotheses and to promote a high-level, integrative account of ERP results across diverse study methods and paradigms. Michigan State University 2011-11-15 /pmc/articles/PMC3235514/ /pubmed/22180824 http://dx.doi.org/10.4056/sigs.2025347 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Community Dialog
Frishkoff, Gwen
Sydes, Jason
Mueller, Kurt
Frank, Robert
Curran, Tim
Connolly, John
Kilborn, Kerry
Molfese, Dennis
Perfetti, Charles
Malony, Allen
Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
title Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
title_full Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
title_fullStr Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
title_full_unstemmed Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
title_short Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
title_sort minimal information for neural electromagnetic ontologies (minemo): a standards-compliant method for analysis and integration of event-related potentials (erp) data
topic Community Dialog
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3235514/
https://www.ncbi.nlm.nih.gov/pubmed/22180824
http://dx.doi.org/10.4056/sigs.2025347
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