Complete genome sequence of Mycobacterium sp. strain (Spyr1) and reclassification to Mycobacterium gilvum Spyr1

Mycobacterium sp.Spyr1 is a newly isolated strain that occurs in a creosote contaminated site in Greece. It was isolated by an enrichment method using pyrene as sole carbon and energy source and is capable of degrading a wide range of PAH substrates including pyrene, fluoranthene, fluorene, anthrace...

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Detalles Bibliográficos
Autores principales: Kallimanis, Aristeidis, Karabika, Eugenia, Mavromatis, Kostantinos, Lapidus, Alla, LaButti, Kurt M., Liolios, Konstantinos, Ivanova, Natalia, Goodwin, Lynne, Woyke, Tanja, Velentzas, Athanasios D., Perisynakis, Angelos, Ouzounis, Christos C., Kyrpides, Nikos C., Koukkou, Anna I., Drainas, Constantin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Short Genome Reports
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236039/
https://www.ncbi.nlm.nih.gov/pubmed/22180818
http://dx.doi.org/10.4056/sigs.2265047
Descripción
Sumario:Mycobacterium sp.Spyr1 is a newly isolated strain that occurs in a creosote contaminated site in Greece. It was isolated by an enrichment method using pyrene as sole carbon and energy source and is capable of degrading a wide range of PAH substrates including pyrene, fluoranthene, fluorene, anthracene and acenapthene. Here we describe the genomic features of this organism, together with the complete sequence and annotation. The genome consists of a 5,547,747 bp chromosome and two plasmids, a larger and a smaller one with sizes of 211,864 and 23,681 bp, respectively. In total, 5,588 genes were predicted and annotated.

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