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Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T))
Pedobacter saltans Steyn et al. 1998 is one of currently 32 species in the genus Pedobacter within the family Sphingobacteriaceae. The species is of interest for its isolated location in the tree of life. Like other members of the genus P. saltans is heparinolytic. Cells of P. saltans show a peculia...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2011
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236043/ https://www.ncbi.nlm.nih.gov/pubmed/22180808 http://dx.doi.org/10.4056/sigs.2154937 |
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| author | Liolios, Konstantinos Sikorski, Johannes Lu, Meagan Nolan, Matt Lapidus, Alla Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Kotsyurbenko, Oleg Rohde, Manfred Tindall, Brian J. Abt, Birte Göker, Markus Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
| author_facet | Liolios, Konstantinos Sikorski, Johannes Lu, Meagan Nolan, Matt Lapidus, Alla Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Kotsyurbenko, Oleg Rohde, Manfred Tindall, Brian J. Abt, Birte Göker, Markus Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. |
| author_sort | Liolios, Konstantinos |
| collection | PubMed |
| description | Pedobacter saltans Steyn et al. 1998 is one of currently 32 species in the genus Pedobacter within the family Sphingobacteriaceae. The species is of interest for its isolated location in the tree of life. Like other members of the genus P. saltans is heparinolytic. Cells of P. saltans show a peculiar gliding, dancing motility and can be distinguished from other Pedobacter strains by their ability to utilize glycerol and the inability to assimilate D-cellobiose. The genome presented here is only the second completed genome sequence of a type strain from a member of the family Sphingobacteriaceae to be published. The 4,635,236 bp long genome with its 3,854 protein-coding and 67 RNA genes consists of one chromosome, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
| format | Online Article Text |
| id | pubmed-3236043 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2011 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-32360432011-12-16 Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) Liolios, Konstantinos Sikorski, Johannes Lu, Meagan Nolan, Matt Lapidus, Alla Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Kotsyurbenko, Oleg Rohde, Manfred Tindall, Brian J. Abt, Birte Göker, Markus Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Stand Genomic Sci Short Genome Reports Pedobacter saltans Steyn et al. 1998 is one of currently 32 species in the genus Pedobacter within the family Sphingobacteriaceae. The species is of interest for its isolated location in the tree of life. Like other members of the genus P. saltans is heparinolytic. Cells of P. saltans show a peculiar gliding, dancing motility and can be distinguished from other Pedobacter strains by their ability to utilize glycerol and the inability to assimilate D-cellobiose. The genome presented here is only the second completed genome sequence of a type strain from a member of the family Sphingobacteriaceae to be published. The 4,635,236 bp long genome with its 3,854 protein-coding and 67 RNA genes consists of one chromosome, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-09-23 /pmc/articles/PMC3236043/ /pubmed/22180808 http://dx.doi.org/10.4056/sigs.2154937 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Liolios, Konstantinos Sikorski, Johannes Lu, Meagan Nolan, Matt Lapidus, Alla Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Kotsyurbenko, Oleg Rohde, Manfred Tindall, Brian J. Abt, Birte Göker, Markus Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C. Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) |
| title | Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) |
| title_full | Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) |
| title_fullStr | Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) |
| title_full_unstemmed | Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) |
| title_short | Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113(T)) |
| title_sort | complete genome sequence of the gliding, heparinolytic pedobacter saltans type strain (113(t)) |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236043/ https://www.ncbi.nlm.nih.gov/pubmed/22180808 http://dx.doi.org/10.4056/sigs.2154937 |
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