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Differences in lateral gene transfer in hypersaline versus thermal environments

BACKGROUND: The role of lateral gene transfer (LGT) in the evolution of microorganisms is only beginning to be understood. While most LGT events occur between closely related individuals, inter-phylum and inter-domain LGT events are not uncommon. These distant transfer events offer potentially great...

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Autores principales: Rhodes, Matthew E, Spear, John R, Oren, Aharon, House, Christopher H
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236060/
https://www.ncbi.nlm.nih.gov/pubmed/21740576
http://dx.doi.org/10.1186/1471-2148-11-199
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author Rhodes, Matthew E
Spear, John R
Oren, Aharon
House, Christopher H
author_facet Rhodes, Matthew E
Spear, John R
Oren, Aharon
House, Christopher H
author_sort Rhodes, Matthew E
collection PubMed
description BACKGROUND: The role of lateral gene transfer (LGT) in the evolution of microorganisms is only beginning to be understood. While most LGT events occur between closely related individuals, inter-phylum and inter-domain LGT events are not uncommon. These distant transfer events offer potentially greater fitness advantages and it is for this reason that these "long distance" LGT events may have significantly impacted the evolution of microbes. One mechanism driving distant LGT events is microbial transformation. Theoretically, transformative events can occur between any two species provided that the DNA of one enters the habitat of the other. Two categories of microorganisms that are well-known for LGT are the thermophiles and halophiles. RESULTS: We identified potential inter-class LGT events into both a thermophilic class of Archaea (Thermoprotei) and a halophilic class of Archaea (Halobacteria). We then categorized these LGT genes as originating in thermophiles and halophiles respectively. While more than 68% of transfer events into Thermoprotei taxa originated in other thermophiles, less than 11% of transfer events into Halobacteria taxa originated in other halophiles. CONCLUSIONS: Our results suggest that there is a fundamental difference between LGT in thermophiles and halophiles. We theorize that the difference lies in the different natures of the environments. While DNA degrades rapidly in thermal environments due to temperature-driven denaturization, hypersaline environments are adept at preserving DNA. Furthermore, most hypersaline environments, as topographical minima, are natural collectors of cellular debris. Thus halophiles would in theory be exposed to a greater diversity and quantity of extracellular DNA than thermophiles.
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spelling pubmed-32360602011-12-13 Differences in lateral gene transfer in hypersaline versus thermal environments Rhodes, Matthew E Spear, John R Oren, Aharon House, Christopher H BMC Evol Biol Research Article BACKGROUND: The role of lateral gene transfer (LGT) in the evolution of microorganisms is only beginning to be understood. While most LGT events occur between closely related individuals, inter-phylum and inter-domain LGT events are not uncommon. These distant transfer events offer potentially greater fitness advantages and it is for this reason that these "long distance" LGT events may have significantly impacted the evolution of microbes. One mechanism driving distant LGT events is microbial transformation. Theoretically, transformative events can occur between any two species provided that the DNA of one enters the habitat of the other. Two categories of microorganisms that are well-known for LGT are the thermophiles and halophiles. RESULTS: We identified potential inter-class LGT events into both a thermophilic class of Archaea (Thermoprotei) and a halophilic class of Archaea (Halobacteria). We then categorized these LGT genes as originating in thermophiles and halophiles respectively. While more than 68% of transfer events into Thermoprotei taxa originated in other thermophiles, less than 11% of transfer events into Halobacteria taxa originated in other halophiles. CONCLUSIONS: Our results suggest that there is a fundamental difference between LGT in thermophiles and halophiles. We theorize that the difference lies in the different natures of the environments. While DNA degrades rapidly in thermal environments due to temperature-driven denaturization, hypersaline environments are adept at preserving DNA. Furthermore, most hypersaline environments, as topographical minima, are natural collectors of cellular debris. Thus halophiles would in theory be exposed to a greater diversity and quantity of extracellular DNA than thermophiles. BioMed Central 2011-07-08 /pmc/articles/PMC3236060/ /pubmed/21740576 http://dx.doi.org/10.1186/1471-2148-11-199 Text en Copyright ©2011 Rhodes et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Rhodes, Matthew E
Spear, John R
Oren, Aharon
House, Christopher H
Differences in lateral gene transfer in hypersaline versus thermal environments
title Differences in lateral gene transfer in hypersaline versus thermal environments
title_full Differences in lateral gene transfer in hypersaline versus thermal environments
title_fullStr Differences in lateral gene transfer in hypersaline versus thermal environments
title_full_unstemmed Differences in lateral gene transfer in hypersaline versus thermal environments
title_short Differences in lateral gene transfer in hypersaline versus thermal environments
title_sort differences in lateral gene transfer in hypersaline versus thermal environments
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3236060/
https://www.ncbi.nlm.nih.gov/pubmed/21740576
http://dx.doi.org/10.1186/1471-2148-11-199
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