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Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry

BACKGROUND: In histopathology, the quantitative assessment of various morphologic features is based on methods originally conceived on specific areas observed through the microscope used. Failure to reproduce the same reference field of view using a different microscope will change the score assesse...

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Autores principales: Puppa, Giacomo, Risio, Mauro, Sheahan, Kieran, Vieth, Michael, Zlobec, Inti, Lugli, Alessandro, Pecori, Sara, Wang, Lai Mun, Langner, Cord, Mitomi, Hiroyuki, Nakamura, Takatoshi, Watanabe, Masahiko, Ueno, Hideki, Chasle, Jacques, Senore, Carlo, Conley, Stephen A., Herlin, Paulette, Lauwers, Gregory Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3237062/
https://www.ncbi.nlm.nih.gov/pubmed/22200031
http://dx.doi.org/10.4103/2153-3539.86830
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author Puppa, Giacomo
Risio, Mauro
Sheahan, Kieran
Vieth, Michael
Zlobec, Inti
Lugli, Alessandro
Pecori, Sara
Wang, Lai Mun
Langner, Cord
Mitomi, Hiroyuki
Nakamura, Takatoshi
Watanabe, Masahiko
Ueno, Hideki
Chasle, Jacques
Senore, Carlo
Conley, Stephen A.
Herlin, Paulette
Lauwers, Gregory Y.
author_facet Puppa, Giacomo
Risio, Mauro
Sheahan, Kieran
Vieth, Michael
Zlobec, Inti
Lugli, Alessandro
Pecori, Sara
Wang, Lai Mun
Langner, Cord
Mitomi, Hiroyuki
Nakamura, Takatoshi
Watanabe, Masahiko
Ueno, Hideki
Chasle, Jacques
Senore, Carlo
Conley, Stephen A.
Herlin, Paulette
Lauwers, Gregory Y.
author_sort Puppa, Giacomo
collection PubMed
description BACKGROUND: In histopathology, the quantitative assessment of various morphologic features is based on methods originally conceived on specific areas observed through the microscope used. Failure to reproduce the same reference field of view using a different microscope will change the score assessed. Visualization of a digital slide on a screen through a dedicated viewer allows selection of the magnification. However, the field of view is rectangular, unlike the circular field of optical microscopy. In addition, the size of the selected area is not evident, and must be calculated. MATERIALS AND METHODS: A digital slide morphometric system was conceived to reproduce the various methods published for assessing tumor budding in colorectal cancer. Eighteen international experts in colorectal cancer were invited to participate in a web-based study by assessing tumor budding with five different methods in 100 digital slides. RESULTS: The specific areas to be tested by each method were marked by colored circles. The areas were grouped in a target-like pattern and then saved as an .xml file. When a digital slide was opened, the .xml file was imported in order to perform the measurements. Since the morphometric tool is composed of layers that can be freely moved on top of the digital slide, the technique was named digital slide dynamic morphometry. Twelve investigators completed the task, the majority of them performing the multiple evaluations of each of the cases in less than 12 minutes. CONCLUSIONS: Digital slide dynamic morphometry has various potential applications and might be a useful tool for the assessment of histologic parameters originally conceived for optical microscopy that need to be quantified.
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spelling pubmed-32370622011-12-23 Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry Puppa, Giacomo Risio, Mauro Sheahan, Kieran Vieth, Michael Zlobec, Inti Lugli, Alessandro Pecori, Sara Wang, Lai Mun Langner, Cord Mitomi, Hiroyuki Nakamura, Takatoshi Watanabe, Masahiko Ueno, Hideki Chasle, Jacques Senore, Carlo Conley, Stephen A. Herlin, Paulette Lauwers, Gregory Y. J Pathol Inform Technical Note BACKGROUND: In histopathology, the quantitative assessment of various morphologic features is based on methods originally conceived on specific areas observed through the microscope used. Failure to reproduce the same reference field of view using a different microscope will change the score assessed. Visualization of a digital slide on a screen through a dedicated viewer allows selection of the magnification. However, the field of view is rectangular, unlike the circular field of optical microscopy. In addition, the size of the selected area is not evident, and must be calculated. MATERIALS AND METHODS: A digital slide morphometric system was conceived to reproduce the various methods published for assessing tumor budding in colorectal cancer. Eighteen international experts in colorectal cancer were invited to participate in a web-based study by assessing tumor budding with five different methods in 100 digital slides. RESULTS: The specific areas to be tested by each method were marked by colored circles. The areas were grouped in a target-like pattern and then saved as an .xml file. When a digital slide was opened, the .xml file was imported in order to perform the measurements. Since the morphometric tool is composed of layers that can be freely moved on top of the digital slide, the technique was named digital slide dynamic morphometry. Twelve investigators completed the task, the majority of them performing the multiple evaluations of each of the cases in less than 12 minutes. CONCLUSIONS: Digital slide dynamic morphometry has various potential applications and might be a useful tool for the assessment of histologic parameters originally conceived for optical microscopy that need to be quantified. Medknow Publications & Media Pvt Ltd 2011-10-29 /pmc/articles/PMC3237062/ /pubmed/22200031 http://dx.doi.org/10.4103/2153-3539.86830 Text en Copyright: © 2011 Puppa G. http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Technical Note
Puppa, Giacomo
Risio, Mauro
Sheahan, Kieran
Vieth, Michael
Zlobec, Inti
Lugli, Alessandro
Pecori, Sara
Wang, Lai Mun
Langner, Cord
Mitomi, Hiroyuki
Nakamura, Takatoshi
Watanabe, Masahiko
Ueno, Hideki
Chasle, Jacques
Senore, Carlo
Conley, Stephen A.
Herlin, Paulette
Lauwers, Gregory Y.
Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry
title Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry
title_full Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry
title_fullStr Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry
title_full_unstemmed Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry
title_short Standardization of whole slide image morphologic assessment with definition of a new application: Digital slide dynamic morphometry
title_sort standardization of whole slide image morphologic assessment with definition of a new application: digital slide dynamic morphometry
topic Technical Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3237062/
https://www.ncbi.nlm.nih.gov/pubmed/22200031
http://dx.doi.org/10.4103/2153-3539.86830
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