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Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy

Laser transmission spectroscopy (LTS) is a quantitative and rapid in vitro technique for measuring the size, shape, and number of nanoparticles in suspension. Here we report on the application of LTS as a novel detection method for species-specific DNA where the presence of one invasive species was...

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Detalles Bibliográficos
Autores principales: Li, Frank, Mahon, Andrew R., Barnes, Matthew A., Feder, Jeffery, Lodge, David M., Hwang, Ching-Ting, Schafer, Robert, Ruggiero, Steven T., Tanner, Carol E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3241715/
https://www.ncbi.nlm.nih.gov/pubmed/22195026
http://dx.doi.org/10.1371/journal.pone.0029224
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author Li, Frank
Mahon, Andrew R.
Barnes, Matthew A.
Feder, Jeffery
Lodge, David M.
Hwang, Ching-Ting
Schafer, Robert
Ruggiero, Steven T.
Tanner, Carol E.
author_facet Li, Frank
Mahon, Andrew R.
Barnes, Matthew A.
Feder, Jeffery
Lodge, David M.
Hwang, Ching-Ting
Schafer, Robert
Ruggiero, Steven T.
Tanner, Carol E.
author_sort Li, Frank
collection PubMed
description Laser transmission spectroscopy (LTS) is a quantitative and rapid in vitro technique for measuring the size, shape, and number of nanoparticles in suspension. Here we report on the application of LTS as a novel detection method for species-specific DNA where the presence of one invasive species was differentiated from a closely related invasive sister species. The method employs carboxylated polystyrene nanoparticles functionalized with short DNA fragments that are complimentary to a specific target DNA sequence. In solution, the DNA strands containing targets bind to the tags resulting in a sizable increase in the nanoparticle diameter, which is rapidly and quantitatively measured using LTS. DNA strands that do not contain the target sequence do not bind and produce no size change of the carboxylated beads. The results show that LTS has the potential to become a quantitative and rapid DNA detection method suitable for many real-world applications.
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spelling pubmed-32417152011-12-22 Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy Li, Frank Mahon, Andrew R. Barnes, Matthew A. Feder, Jeffery Lodge, David M. Hwang, Ching-Ting Schafer, Robert Ruggiero, Steven T. Tanner, Carol E. PLoS One Research Article Laser transmission spectroscopy (LTS) is a quantitative and rapid in vitro technique for measuring the size, shape, and number of nanoparticles in suspension. Here we report on the application of LTS as a novel detection method for species-specific DNA where the presence of one invasive species was differentiated from a closely related invasive sister species. The method employs carboxylated polystyrene nanoparticles functionalized with short DNA fragments that are complimentary to a specific target DNA sequence. In solution, the DNA strands containing targets bind to the tags resulting in a sizable increase in the nanoparticle diameter, which is rapidly and quantitatively measured using LTS. DNA strands that do not contain the target sequence do not bind and produce no size change of the carboxylated beads. The results show that LTS has the potential to become a quantitative and rapid DNA detection method suitable for many real-world applications. Public Library of Science 2011-12-16 /pmc/articles/PMC3241715/ /pubmed/22195026 http://dx.doi.org/10.1371/journal.pone.0029224 Text en Li et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Li, Frank
Mahon, Andrew R.
Barnes, Matthew A.
Feder, Jeffery
Lodge, David M.
Hwang, Ching-Ting
Schafer, Robert
Ruggiero, Steven T.
Tanner, Carol E.
Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy
title Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy
title_full Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy
title_fullStr Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy
title_full_unstemmed Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy
title_short Quantitative and Rapid DNA Detection by Laser Transmission Spectroscopy
title_sort quantitative and rapid dna detection by laser transmission spectroscopy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3241715/
https://www.ncbi.nlm.nih.gov/pubmed/22195026
http://dx.doi.org/10.1371/journal.pone.0029224
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