PDBe: Protein Data Bank in Europe

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The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make struct...

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Autores principales: Velankar, S., Alhroub, Y., Best, C., Caboche, S., Conroy, M. J., Dana, J. M., Fernandez Montecelo, M. A., van Ginkel, G., Golovin, A., Gore, S. P., Gutmanas, A., Haslam, P., Hendrickx, P. M. S., Heuson, E., Hirshberg, M., John, M., Lagerstedt, I., Mir, S., Newman, L. E., Oldfield, T. J., Patwardhan, A., Rinaldi, L., Sahni, G., Sanz-García, E., Sen, S., Slowley, R., Suarez-Uruena, A., Swaminathan, G. J., Symmons, M. F., Vranken, W. F., Wainwright, M., Kleywegt, G. J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245096/
https://www.ncbi.nlm.nih.gov/pubmed/22110033
http://dx.doi.org/10.1093/nar/gkr998
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author Velankar, S.
Alhroub, Y.
Best, C.
Caboche, S.
Conroy, M. J.
Dana, J. M.
Fernandez Montecelo, M. A.
van Ginkel, G.
Golovin, A.
Gore, S. P.
Gutmanas, A.
Haslam, P.
Hendrickx, P. M. S.
Heuson, E.
Hirshberg, M.
John, M.
Lagerstedt, I.
Mir, S.
Newman, L. E.
Oldfield, T. J.
Patwardhan, A.
Rinaldi, L.
Sahni, G.
Sanz-García, E.
Sen, S.
Slowley, R.
Suarez-Uruena, A.
Swaminathan, G. J.
Symmons, M. F.
Vranken, W. F.
Wainwright, M.
Kleywegt, G. J.
author_facet Velankar, S.
Alhroub, Y.
Best, C.
Caboche, S.
Conroy, M. J.
Dana, J. M.
Fernandez Montecelo, M. A.
van Ginkel, G.
Golovin, A.
Gore, S. P.
Gutmanas, A.
Haslam, P.
Hendrickx, P. M. S.
Heuson, E.
Hirshberg, M.
John, M.
Lagerstedt, I.
Mir, S.
Newman, L. E.
Oldfield, T. J.
Patwardhan, A.
Rinaldi, L.
Sahni, G.
Sanz-García, E.
Sen, S.
Slowley, R.
Suarez-Uruena, A.
Swaminathan, G. J.
Symmons, M. F.
Vranken, W. F.
Wainwright, M.
Kleywegt, G. J.
author_sort Velankar, S.
collection PubMed
description The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make structure-related data more accessible to the biomedical community. Here we describe recently developed, extended or improved services, including an animated structure-presentation widget (PDBportfolio), a widget to graphically display the coverage of any UniProt sequence in the PDB (UniPDB), chemistry- and taxonomy-based PDB-archive browsers (PDBeXplore), and a tool for interactive visualization of NMR structures, corresponding experimental data as well as validation and analysis results (Vivaldi).
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spelling pubmed-32450962012-01-10 PDBe: Protein Data Bank in Europe Velankar, S. Alhroub, Y. Best, C. Caboche, S. Conroy, M. J. Dana, J. M. Fernandez Montecelo, M. A. van Ginkel, G. Golovin, A. Gore, S. P. Gutmanas, A. Haslam, P. Hendrickx, P. M. S. Heuson, E. Hirshberg, M. John, M. Lagerstedt, I. Mir, S. Newman, L. E. Oldfield, T. J. Patwardhan, A. Rinaldi, L. Sahni, G. Sanz-García, E. Sen, S. Slowley, R. Suarez-Uruena, A. Swaminathan, G. J. Symmons, M. F. Vranken, W. F. Wainwright, M. Kleywegt, G. J. Nucleic Acids Res Articles The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make structure-related data more accessible to the biomedical community. Here we describe recently developed, extended or improved services, including an animated structure-presentation widget (PDBportfolio), a widget to graphically display the coverage of any UniProt sequence in the PDB (UniPDB), chemistry- and taxonomy-based PDB-archive browsers (PDBeXplore), and a tool for interactive visualization of NMR structures, corresponding experimental data as well as validation and analysis results (Vivaldi). Oxford University Press 2012-01 2011-11-21 /pmc/articles/PMC3245096/ /pubmed/22110033 http://dx.doi.org/10.1093/nar/gkr998 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Velankar, S.
Alhroub, Y.
Best, C.
Caboche, S.
Conroy, M. J.
Dana, J. M.
Fernandez Montecelo, M. A.
van Ginkel, G.
Golovin, A.
Gore, S. P.
Gutmanas, A.
Haslam, P.
Hendrickx, P. M. S.
Heuson, E.
Hirshberg, M.
John, M.
Lagerstedt, I.
Mir, S.
Newman, L. E.
Oldfield, T. J.
Patwardhan, A.
Rinaldi, L.
Sahni, G.
Sanz-García, E.
Sen, S.
Slowley, R.
Suarez-Uruena, A.
Swaminathan, G. J.
Symmons, M. F.
Vranken, W. F.
Wainwright, M.
Kleywegt, G. J.
PDBe: Protein Data Bank in Europe
title PDBe: Protein Data Bank in Europe
title_full PDBe: Protein Data Bank in Europe
title_fullStr PDBe: Protein Data Bank in Europe
title_full_unstemmed PDBe: Protein Data Bank in Europe
title_short PDBe: Protein Data Bank in Europe
title_sort pdbe: protein data bank in europe
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245096/
https://www.ncbi.nlm.nih.gov/pubmed/22110033
http://dx.doi.org/10.1093/nar/gkr998
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