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PomBase: a comprehensive online resource for fission yeast

PomBase (www.pombase.org) is a new model organism database established to provide access to comprehensive, accurate, and up-to-date molecular data and biological information for the fission yeast Schizosaccharomyces pombe to effectively support both exploratory and hypothesis-driven research. PomBas...

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Detalles Bibliográficos
Autores principales: Wood, Valerie, Harris, Midori A., McDowall, Mark D., Rutherford, Kim, Vaughan, Brendan W., Staines, Daniel M., Aslett, Martin, Lock, Antonia, Bähler, Jürg, Kersey, Paul J., Oliver, Stephen G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245111/
https://www.ncbi.nlm.nih.gov/pubmed/22039153
http://dx.doi.org/10.1093/nar/gkr853
Descripción
Sumario:PomBase (www.pombase.org) is a new model organism database established to provide access to comprehensive, accurate, and up-to-date molecular data and biological information for the fission yeast Schizosaccharomyces pombe to effectively support both exploratory and hypothesis-driven research. PomBase encompasses annotation of genomic sequence and features, comprehensive manual literature curation and genome-wide data sets, and supports sophisticated user-defined queries. The implementation of PomBase integrates a Chado relational database that houses manually curated data with Ensembl software that supports sequence-based annotation and web access. PomBase will provide user-friendly tools to promote curation by experts within the fission yeast community. This will make a key contribution to shaping its content and ensuring its comprehensiveness and long-term relevance.