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Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
vasa is a highly conserved RNA helicase involved in animal germ cell development. Among vertebrate species, it is typically present as a single copy per genome. Here we report the isolation and sequencing of BAC clones for Nile tilapia vasa genes. Contrary to a previous report that Nile tilapia have...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245284/ https://www.ncbi.nlm.nih.gov/pubmed/22216289 http://dx.doi.org/10.1371/journal.pone.0029477 |
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author | Fujimura, Koji Conte, Matthew A. Kocher, Thomas D. |
author_facet | Fujimura, Koji Conte, Matthew A. Kocher, Thomas D. |
author_sort | Fujimura, Koji |
collection | PubMed |
description | vasa is a highly conserved RNA helicase involved in animal germ cell development. Among vertebrate species, it is typically present as a single copy per genome. Here we report the isolation and sequencing of BAC clones for Nile tilapia vasa genes. Contrary to a previous report that Nile tilapia have a single copy of the vasa gene, we find evidence for at least three vasa gene loci. The vasa gene locus was duplicated from the original site and integrated into two distant novel sites. For one of these insertions we find evidence that the duplication was mediated by a circular DNA intermediate. This mechanism of gene duplication may explain the origin of isolated gene duplicates during the evolution of fish genomes. These data provide a foundation for studying the role of multiple vasa genes in the development of tilapia gonads, and will contribute to investigations of the molecular mechanisms of sex determination and evolution in cichlid fishes. |
format | Online Article Text |
id | pubmed-3245284 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-32452842012-01-03 Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes Fujimura, Koji Conte, Matthew A. Kocher, Thomas D. PLoS One Research Article vasa is a highly conserved RNA helicase involved in animal germ cell development. Among vertebrate species, it is typically present as a single copy per genome. Here we report the isolation and sequencing of BAC clones for Nile tilapia vasa genes. Contrary to a previous report that Nile tilapia have a single copy of the vasa gene, we find evidence for at least three vasa gene loci. The vasa gene locus was duplicated from the original site and integrated into two distant novel sites. For one of these insertions we find evidence that the duplication was mediated by a circular DNA intermediate. This mechanism of gene duplication may explain the origin of isolated gene duplicates during the evolution of fish genomes. These data provide a foundation for studying the role of multiple vasa genes in the development of tilapia gonads, and will contribute to investigations of the molecular mechanisms of sex determination and evolution in cichlid fishes. Public Library of Science 2011-12-22 /pmc/articles/PMC3245284/ /pubmed/22216289 http://dx.doi.org/10.1371/journal.pone.0029477 Text en Fujimura et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Fujimura, Koji Conte, Matthew A. Kocher, Thomas D. Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes |
title | Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes |
title_full | Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes |
title_fullStr | Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes |
title_full_unstemmed | Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes |
title_short | Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes |
title_sort | circular dna intermediate in the duplication of nile tilapia vasa genes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245284/ https://www.ncbi.nlm.nih.gov/pubmed/22216289 http://dx.doi.org/10.1371/journal.pone.0029477 |
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