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Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes

vasa is a highly conserved RNA helicase involved in animal germ cell development. Among vertebrate species, it is typically present as a single copy per genome. Here we report the isolation and sequencing of BAC clones for Nile tilapia vasa genes. Contrary to a previous report that Nile tilapia have...

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Detalles Bibliográficos
Autores principales: Fujimura, Koji, Conte, Matthew A., Kocher, Thomas D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245284/
https://www.ncbi.nlm.nih.gov/pubmed/22216289
http://dx.doi.org/10.1371/journal.pone.0029477
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author Fujimura, Koji
Conte, Matthew A.
Kocher, Thomas D.
author_facet Fujimura, Koji
Conte, Matthew A.
Kocher, Thomas D.
author_sort Fujimura, Koji
collection PubMed
description vasa is a highly conserved RNA helicase involved in animal germ cell development. Among vertebrate species, it is typically present as a single copy per genome. Here we report the isolation and sequencing of BAC clones for Nile tilapia vasa genes. Contrary to a previous report that Nile tilapia have a single copy of the vasa gene, we find evidence for at least three vasa gene loci. The vasa gene locus was duplicated from the original site and integrated into two distant novel sites. For one of these insertions we find evidence that the duplication was mediated by a circular DNA intermediate. This mechanism of gene duplication may explain the origin of isolated gene duplicates during the evolution of fish genomes. These data provide a foundation for studying the role of multiple vasa genes in the development of tilapia gonads, and will contribute to investigations of the molecular mechanisms of sex determination and evolution in cichlid fishes.
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spelling pubmed-32452842012-01-03 Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes Fujimura, Koji Conte, Matthew A. Kocher, Thomas D. PLoS One Research Article vasa is a highly conserved RNA helicase involved in animal germ cell development. Among vertebrate species, it is typically present as a single copy per genome. Here we report the isolation and sequencing of BAC clones for Nile tilapia vasa genes. Contrary to a previous report that Nile tilapia have a single copy of the vasa gene, we find evidence for at least three vasa gene loci. The vasa gene locus was duplicated from the original site and integrated into two distant novel sites. For one of these insertions we find evidence that the duplication was mediated by a circular DNA intermediate. This mechanism of gene duplication may explain the origin of isolated gene duplicates during the evolution of fish genomes. These data provide a foundation for studying the role of multiple vasa genes in the development of tilapia gonads, and will contribute to investigations of the molecular mechanisms of sex determination and evolution in cichlid fishes. Public Library of Science 2011-12-22 /pmc/articles/PMC3245284/ /pubmed/22216289 http://dx.doi.org/10.1371/journal.pone.0029477 Text en Fujimura et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Fujimura, Koji
Conte, Matthew A.
Kocher, Thomas D.
Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
title Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
title_full Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
title_fullStr Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
title_full_unstemmed Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
title_short Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
title_sort circular dna intermediate in the duplication of nile tilapia vasa genes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245284/
https://www.ncbi.nlm.nih.gov/pubmed/22216289
http://dx.doi.org/10.1371/journal.pone.0029477
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