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Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4

Mass production of glucosamine (GlcN) using microbial cells is a worthy approach to increase added values and keep safety problems in GlcN production process. Prior to set up a microbial cellular platform, this study was to assess acetate metabolism in Citrobacter sp. BL-4 (BL-4) which has produced...

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Autores principales: Kim, Young-Man, Lee, Sung-Eun, Park, Byeoung-Soo, Son, Mi-Kyung, Jung, Young-Mi, Yang, Seung-Ok, Choi, Hyung-Kyoon, Hur, Sung-Ho, Yum, Jong Hwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248649/
https://www.ncbi.nlm.nih.gov/pubmed/22211106
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author Kim, Young-Man
Lee, Sung-Eun
Park, Byeoung-Soo
Son, Mi-Kyung
Jung, Young-Mi
Yang, Seung-Ok
Choi, Hyung-Kyoon
Hur, Sung-Ho
Yum, Jong Hwa
author_facet Kim, Young-Man
Lee, Sung-Eun
Park, Byeoung-Soo
Son, Mi-Kyung
Jung, Young-Mi
Yang, Seung-Ok
Choi, Hyung-Kyoon
Hur, Sung-Ho
Yum, Jong Hwa
author_sort Kim, Young-Man
collection PubMed
description Mass production of glucosamine (GlcN) using microbial cells is a worthy approach to increase added values and keep safety problems in GlcN production process. Prior to set up a microbial cellular platform, this study was to assess acetate metabolism in Citrobacter sp. BL-4 (BL-4) which has produced a polyglucosamine PGB-2. The LC-MS analysis was conducted after protein separation on the 1D-PAGE to accomplish the purpose of this study. 280 proteins were totally identified and 188 proteins were separated as acetate-related proteins in BL-4. Acetate was converted to acetyl-CoA by acetyl-CoA synthetase up-regulated in the acetate medium. The glyoxylate bypass in the acetate medium was up-regulated with over-expression of isocitrate lyases and 2D-PAGE confirmed this differential expression. Using (1)H-NMR analysis, the product of isocitrate lyases, succinate, increased about 15 times in the acetate medium. During acetate metabolism proteins involved in the lipid metabolism and hexosamine biosynthesis were over-expressed in the acetate medium, while proteins involved in TCA cycle, pentose phosphate cycle and purine metabolism were down-regulated. Taken together, the results from the proteomic analysis can be applied to improve GlcN production and to develop metabolic engineering in BL-4.
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spelling pubmed-32486492012-01-01 Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 Kim, Young-Man Lee, Sung-Eun Park, Byeoung-Soo Son, Mi-Kyung Jung, Young-Mi Yang, Seung-Ok Choi, Hyung-Kyoon Hur, Sung-Ho Yum, Jong Hwa Int J Biol Sci Research Paper Mass production of glucosamine (GlcN) using microbial cells is a worthy approach to increase added values and keep safety problems in GlcN production process. Prior to set up a microbial cellular platform, this study was to assess acetate metabolism in Citrobacter sp. BL-4 (BL-4) which has produced a polyglucosamine PGB-2. The LC-MS analysis was conducted after protein separation on the 1D-PAGE to accomplish the purpose of this study. 280 proteins were totally identified and 188 proteins were separated as acetate-related proteins in BL-4. Acetate was converted to acetyl-CoA by acetyl-CoA synthetase up-regulated in the acetate medium. The glyoxylate bypass in the acetate medium was up-regulated with over-expression of isocitrate lyases and 2D-PAGE confirmed this differential expression. Using (1)H-NMR analysis, the product of isocitrate lyases, succinate, increased about 15 times in the acetate medium. During acetate metabolism proteins involved in the lipid metabolism and hexosamine biosynthesis were over-expressed in the acetate medium, while proteins involved in TCA cycle, pentose phosphate cycle and purine metabolism were down-regulated. Taken together, the results from the proteomic analysis can be applied to improve GlcN production and to develop metabolic engineering in BL-4. Ivyspring International Publisher 2011-11-23 /pmc/articles/PMC3248649/ /pubmed/22211106 Text en © Ivyspring International Publisher. This is an open-access article distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by-nc-nd/3.0/). Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited.
spellingShingle Research Paper
Kim, Young-Man
Lee, Sung-Eun
Park, Byeoung-Soo
Son, Mi-Kyung
Jung, Young-Mi
Yang, Seung-Ok
Choi, Hyung-Kyoon
Hur, Sung-Ho
Yum, Jong Hwa
Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
title Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
title_full Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
title_fullStr Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
title_full_unstemmed Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
title_short Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
title_sort proteomic analysis on acetate metabolism in citrobacter sp. bl-4
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248649/
https://www.ncbi.nlm.nih.gov/pubmed/22211106
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