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Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4
Mass production of glucosamine (GlcN) using microbial cells is a worthy approach to increase added values and keep safety problems in GlcN production process. Prior to set up a microbial cellular platform, this study was to assess acetate metabolism in Citrobacter sp. BL-4 (BL-4) which has produced...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Ivyspring International Publisher
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248649/ https://www.ncbi.nlm.nih.gov/pubmed/22211106 |
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author | Kim, Young-Man Lee, Sung-Eun Park, Byeoung-Soo Son, Mi-Kyung Jung, Young-Mi Yang, Seung-Ok Choi, Hyung-Kyoon Hur, Sung-Ho Yum, Jong Hwa |
author_facet | Kim, Young-Man Lee, Sung-Eun Park, Byeoung-Soo Son, Mi-Kyung Jung, Young-Mi Yang, Seung-Ok Choi, Hyung-Kyoon Hur, Sung-Ho Yum, Jong Hwa |
author_sort | Kim, Young-Man |
collection | PubMed |
description | Mass production of glucosamine (GlcN) using microbial cells is a worthy approach to increase added values and keep safety problems in GlcN production process. Prior to set up a microbial cellular platform, this study was to assess acetate metabolism in Citrobacter sp. BL-4 (BL-4) which has produced a polyglucosamine PGB-2. The LC-MS analysis was conducted after protein separation on the 1D-PAGE to accomplish the purpose of this study. 280 proteins were totally identified and 188 proteins were separated as acetate-related proteins in BL-4. Acetate was converted to acetyl-CoA by acetyl-CoA synthetase up-regulated in the acetate medium. The glyoxylate bypass in the acetate medium was up-regulated with over-expression of isocitrate lyases and 2D-PAGE confirmed this differential expression. Using (1)H-NMR analysis, the product of isocitrate lyases, succinate, increased about 15 times in the acetate medium. During acetate metabolism proteins involved in the lipid metabolism and hexosamine biosynthesis were over-expressed in the acetate medium, while proteins involved in TCA cycle, pentose phosphate cycle and purine metabolism were down-regulated. Taken together, the results from the proteomic analysis can be applied to improve GlcN production and to develop metabolic engineering in BL-4. |
format | Online Article Text |
id | pubmed-3248649 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-32486492012-01-01 Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 Kim, Young-Man Lee, Sung-Eun Park, Byeoung-Soo Son, Mi-Kyung Jung, Young-Mi Yang, Seung-Ok Choi, Hyung-Kyoon Hur, Sung-Ho Yum, Jong Hwa Int J Biol Sci Research Paper Mass production of glucosamine (GlcN) using microbial cells is a worthy approach to increase added values and keep safety problems in GlcN production process. Prior to set up a microbial cellular platform, this study was to assess acetate metabolism in Citrobacter sp. BL-4 (BL-4) which has produced a polyglucosamine PGB-2. The LC-MS analysis was conducted after protein separation on the 1D-PAGE to accomplish the purpose of this study. 280 proteins were totally identified and 188 proteins were separated as acetate-related proteins in BL-4. Acetate was converted to acetyl-CoA by acetyl-CoA synthetase up-regulated in the acetate medium. The glyoxylate bypass in the acetate medium was up-regulated with over-expression of isocitrate lyases and 2D-PAGE confirmed this differential expression. Using (1)H-NMR analysis, the product of isocitrate lyases, succinate, increased about 15 times in the acetate medium. During acetate metabolism proteins involved in the lipid metabolism and hexosamine biosynthesis were over-expressed in the acetate medium, while proteins involved in TCA cycle, pentose phosphate cycle and purine metabolism were down-regulated. Taken together, the results from the proteomic analysis can be applied to improve GlcN production and to develop metabolic engineering in BL-4. Ivyspring International Publisher 2011-11-23 /pmc/articles/PMC3248649/ /pubmed/22211106 Text en © Ivyspring International Publisher. This is an open-access article distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by-nc-nd/3.0/). Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited. |
spellingShingle | Research Paper Kim, Young-Man Lee, Sung-Eun Park, Byeoung-Soo Son, Mi-Kyung Jung, Young-Mi Yang, Seung-Ok Choi, Hyung-Kyoon Hur, Sung-Ho Yum, Jong Hwa Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 |
title | Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 |
title_full | Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 |
title_fullStr | Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 |
title_full_unstemmed | Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 |
title_short | Proteomic Analysis on Acetate Metabolism in Citrobacter sp. BL-4 |
title_sort | proteomic analysis on acetate metabolism in citrobacter sp. bl-4 |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248649/ https://www.ncbi.nlm.nih.gov/pubmed/22211106 |
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