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Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
BACKGROUND: The aim of the present study was to identify chromosomal loci that contribute to the pathogenesis of aortic dissection (AD) in a Korean population using array comparative genomic hybridization (CGH) and to confirm the results using real-time polymerase chain reaction (PCR). MATERIALS AND...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society for Thoracic and Cardiovascular Surgery
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3249287/ https://www.ncbi.nlm.nih.gov/pubmed/22263138 http://dx.doi.org/10.5090/kjtcs.2011.44.2.123 |
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author | Suh, Jong Hui Yoon, Jeong-Seob Kwon, Jong-Bum Kim, Hwan Wook Wang, Young-Pil |
author_facet | Suh, Jong Hui Yoon, Jeong-Seob Kwon, Jong-Bum Kim, Hwan Wook Wang, Young-Pil |
author_sort | Suh, Jong Hui |
collection | PubMed |
description | BACKGROUND: The aim of the present study was to identify chromosomal loci that contribute to the pathogenesis of aortic dissection (AD) in a Korean population using array comparative genomic hybridization (CGH) and to confirm the results using real-time polymerase chain reaction (PCR). MATERIALS AND METHODS: Eighteen patients with ADs were enrolled in this study. Genomic DNA was extracted from individual blood samples, and array CGH analyses were performed. Four corresponding genes with obvious genomic changes were analyzed using real-time PCR in order to assess the level of genomic imbalance identified by array CGH. RESULTS: Genomic gains were most frequently detected at 8q24.3 (56%), followed by regions 7q35, 11q12.2, and 15q25.2 (50%). Genomic losses were most frequently observed at 4q35.2 (56%). Real-time PCR confirmed the results of the array CGH studies of the COL6A2, DGCR14, PCSK6, and SDHA genes. CONCLUSION: This is the first study to identify candidate regions by array CGH in patients with ADs. The identification of genes that may predispose an individual to AD may lead to a better understanding of the mechanism of AD formation. Further multicenter studies comparing cohorts of patients of different ethnicities are warranted. |
format | Online Article Text |
id | pubmed-3249287 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Korean Society for Thoracic and Cardiovascular Surgery |
record_format | MEDLINE/PubMed |
spelling | pubmed-32492872012-01-19 Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections Suh, Jong Hui Yoon, Jeong-Seob Kwon, Jong-Bum Kim, Hwan Wook Wang, Young-Pil Korean J Thorac Cardiovasc Surg Clinical Research BACKGROUND: The aim of the present study was to identify chromosomal loci that contribute to the pathogenesis of aortic dissection (AD) in a Korean population using array comparative genomic hybridization (CGH) and to confirm the results using real-time polymerase chain reaction (PCR). MATERIALS AND METHODS: Eighteen patients with ADs were enrolled in this study. Genomic DNA was extracted from individual blood samples, and array CGH analyses were performed. Four corresponding genes with obvious genomic changes were analyzed using real-time PCR in order to assess the level of genomic imbalance identified by array CGH. RESULTS: Genomic gains were most frequently detected at 8q24.3 (56%), followed by regions 7q35, 11q12.2, and 15q25.2 (50%). Genomic losses were most frequently observed at 4q35.2 (56%). Real-time PCR confirmed the results of the array CGH studies of the COL6A2, DGCR14, PCSK6, and SDHA genes. CONCLUSION: This is the first study to identify candidate regions by array CGH in patients with ADs. The identification of genes that may predispose an individual to AD may lead to a better understanding of the mechanism of AD formation. Further multicenter studies comparing cohorts of patients of different ethnicities are warranted. Korean Society for Thoracic and Cardiovascular Surgery 2011-04 2011-04-14 /pmc/articles/PMC3249287/ /pubmed/22263138 http://dx.doi.org/10.5090/kjtcs.2011.44.2.123 Text en © The Korean Society for Thoracic and Cardiovascular Surgery. 2011. All right reserved. This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Clinical Research Suh, Jong Hui Yoon, Jeong-Seob Kwon, Jong-Bum Kim, Hwan Wook Wang, Young-Pil Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections |
title | Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections |
title_full | Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections |
title_fullStr | Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections |
title_full_unstemmed | Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections |
title_short | Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections |
title_sort | identification of genomic aberrations by array comparative genomic hybridization in patients with aortic dissections |
topic | Clinical Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3249287/ https://www.ncbi.nlm.nih.gov/pubmed/22263138 http://dx.doi.org/10.5090/kjtcs.2011.44.2.123 |
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