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Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections

BACKGROUND: The aim of the present study was to identify chromosomal loci that contribute to the pathogenesis of aortic dissection (AD) in a Korean population using array comparative genomic hybridization (CGH) and to confirm the results using real-time polymerase chain reaction (PCR). MATERIALS AND...

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Autores principales: Suh, Jong Hui, Yoon, Jeong-Seob, Kwon, Jong-Bum, Kim, Hwan Wook, Wang, Young-Pil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society for Thoracic and Cardiovascular Surgery 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3249287/
https://www.ncbi.nlm.nih.gov/pubmed/22263138
http://dx.doi.org/10.5090/kjtcs.2011.44.2.123
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author Suh, Jong Hui
Yoon, Jeong-Seob
Kwon, Jong-Bum
Kim, Hwan Wook
Wang, Young-Pil
author_facet Suh, Jong Hui
Yoon, Jeong-Seob
Kwon, Jong-Bum
Kim, Hwan Wook
Wang, Young-Pil
author_sort Suh, Jong Hui
collection PubMed
description BACKGROUND: The aim of the present study was to identify chromosomal loci that contribute to the pathogenesis of aortic dissection (AD) in a Korean population using array comparative genomic hybridization (CGH) and to confirm the results using real-time polymerase chain reaction (PCR). MATERIALS AND METHODS: Eighteen patients with ADs were enrolled in this study. Genomic DNA was extracted from individual blood samples, and array CGH analyses were performed. Four corresponding genes with obvious genomic changes were analyzed using real-time PCR in order to assess the level of genomic imbalance identified by array CGH. RESULTS: Genomic gains were most frequently detected at 8q24.3 (56%), followed by regions 7q35, 11q12.2, and 15q25.2 (50%). Genomic losses were most frequently observed at 4q35.2 (56%). Real-time PCR confirmed the results of the array CGH studies of the COL6A2, DGCR14, PCSK6, and SDHA genes. CONCLUSION: This is the first study to identify candidate regions by array CGH in patients with ADs. The identification of genes that may predispose an individual to AD may lead to a better understanding of the mechanism of AD formation. Further multicenter studies comparing cohorts of patients of different ethnicities are warranted.
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spelling pubmed-32492872012-01-19 Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections Suh, Jong Hui Yoon, Jeong-Seob Kwon, Jong-Bum Kim, Hwan Wook Wang, Young-Pil Korean J Thorac Cardiovasc Surg Clinical Research BACKGROUND: The aim of the present study was to identify chromosomal loci that contribute to the pathogenesis of aortic dissection (AD) in a Korean population using array comparative genomic hybridization (CGH) and to confirm the results using real-time polymerase chain reaction (PCR). MATERIALS AND METHODS: Eighteen patients with ADs were enrolled in this study. Genomic DNA was extracted from individual blood samples, and array CGH analyses were performed. Four corresponding genes with obvious genomic changes were analyzed using real-time PCR in order to assess the level of genomic imbalance identified by array CGH. RESULTS: Genomic gains were most frequently detected at 8q24.3 (56%), followed by regions 7q35, 11q12.2, and 15q25.2 (50%). Genomic losses were most frequently observed at 4q35.2 (56%). Real-time PCR confirmed the results of the array CGH studies of the COL6A2, DGCR14, PCSK6, and SDHA genes. CONCLUSION: This is the first study to identify candidate regions by array CGH in patients with ADs. The identification of genes that may predispose an individual to AD may lead to a better understanding of the mechanism of AD formation. Further multicenter studies comparing cohorts of patients of different ethnicities are warranted. Korean Society for Thoracic and Cardiovascular Surgery 2011-04 2011-04-14 /pmc/articles/PMC3249287/ /pubmed/22263138 http://dx.doi.org/10.5090/kjtcs.2011.44.2.123 Text en © The Korean Society for Thoracic and Cardiovascular Surgery. 2011. All right reserved. This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Research
Suh, Jong Hui
Yoon, Jeong-Seob
Kwon, Jong-Bum
Kim, Hwan Wook
Wang, Young-Pil
Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
title Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
title_full Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
title_fullStr Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
title_full_unstemmed Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
title_short Identification of Genomic Aberrations by Array Comparative Genomic Hybridization in Patients with Aortic Dissections
title_sort identification of genomic aberrations by array comparative genomic hybridization in patients with aortic dissections
topic Clinical Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3249287/
https://www.ncbi.nlm.nih.gov/pubmed/22263138
http://dx.doi.org/10.5090/kjtcs.2011.44.2.123
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