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Darwin Core: An Evolving Community-Developed Biodiversity Data Standard

Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamen...

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Detalles Bibliográficos
Autores principales: Wieczorek, John, Bloom, David, Guralnick, Robert, Blum, Stan, Döring, Markus, Giovanni, Renato, Robertson, Tim, Vieglais, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3253084/
https://www.ncbi.nlm.nih.gov/pubmed/22238640
http://dx.doi.org/10.1371/journal.pone.0029715
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author Wieczorek, John
Bloom, David
Guralnick, Robert
Blum, Stan
Döring, Markus
Giovanni, Renato
Robertson, Tim
Vieglais, David
author_facet Wieczorek, John
Bloom, David
Guralnick, Robert
Blum, Stan
Döring, Markus
Giovanni, Renato
Robertson, Tim
Vieglais, David
author_sort Wieczorek, John
collection PubMed
description Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamental to this advance are definitions of common terms. This paper describes the evolution and development of Darwin Core, a data standard for publishing and integrating biodiversity information. We focus on the categories of terms that define the standard, differences between simple and relational Darwin Core, how the standard has been implemented, and the community processes that are essential for maintenance and growth of the standard. We present case-study extensions of the Darwin Core into new research communities, including metagenomics and genetic resources. We close by showing how Darwin Core records are integrated to create new knowledge products documenting species distributions and changes due to environmental perturbations.
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spelling pubmed-32530842012-01-11 Darwin Core: An Evolving Community-Developed Biodiversity Data Standard Wieczorek, John Bloom, David Guralnick, Robert Blum, Stan Döring, Markus Giovanni, Renato Robertson, Tim Vieglais, David PLoS One Research Article Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamental to this advance are definitions of common terms. This paper describes the evolution and development of Darwin Core, a data standard for publishing and integrating biodiversity information. We focus on the categories of terms that define the standard, differences between simple and relational Darwin Core, how the standard has been implemented, and the community processes that are essential for maintenance and growth of the standard. We present case-study extensions of the Darwin Core into new research communities, including metagenomics and genetic resources. We close by showing how Darwin Core records are integrated to create new knowledge products documenting species distributions and changes due to environmental perturbations. Public Library of Science 2012-01-06 /pmc/articles/PMC3253084/ /pubmed/22238640 http://dx.doi.org/10.1371/journal.pone.0029715 Text en Wieczorek et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Wieczorek, John
Bloom, David
Guralnick, Robert
Blum, Stan
Döring, Markus
Giovanni, Renato
Robertson, Tim
Vieglais, David
Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
title Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
title_full Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
title_fullStr Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
title_full_unstemmed Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
title_short Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
title_sort darwin core: an evolving community-developed biodiversity data standard
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3253084/
https://www.ncbi.nlm.nih.gov/pubmed/22238640
http://dx.doi.org/10.1371/journal.pone.0029715
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