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Darwin Core: An Evolving Community-Developed Biodiversity Data Standard
Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamen...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3253084/ https://www.ncbi.nlm.nih.gov/pubmed/22238640 http://dx.doi.org/10.1371/journal.pone.0029715 |
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author | Wieczorek, John Bloom, David Guralnick, Robert Blum, Stan Döring, Markus Giovanni, Renato Robertson, Tim Vieglais, David |
author_facet | Wieczorek, John Bloom, David Guralnick, Robert Blum, Stan Döring, Markus Giovanni, Renato Robertson, Tim Vieglais, David |
author_sort | Wieczorek, John |
collection | PubMed |
description | Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamental to this advance are definitions of common terms. This paper describes the evolution and development of Darwin Core, a data standard for publishing and integrating biodiversity information. We focus on the categories of terms that define the standard, differences between simple and relational Darwin Core, how the standard has been implemented, and the community processes that are essential for maintenance and growth of the standard. We present case-study extensions of the Darwin Core into new research communities, including metagenomics and genetic resources. We close by showing how Darwin Core records are integrated to create new knowledge products documenting species distributions and changes due to environmental perturbations. |
format | Online Article Text |
id | pubmed-3253084 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-32530842012-01-11 Darwin Core: An Evolving Community-Developed Biodiversity Data Standard Wieczorek, John Bloom, David Guralnick, Robert Blum, Stan Döring, Markus Giovanni, Renato Robertson, Tim Vieglais, David PLoS One Research Article Biodiversity data derive from myriad sources stored in various formats on many distinct hardware and software platforms. An essential step towards understanding global patterns of biodiversity is to provide a standardized view of these heterogeneous data sources to improve interoperability. Fundamental to this advance are definitions of common terms. This paper describes the evolution and development of Darwin Core, a data standard for publishing and integrating biodiversity information. We focus on the categories of terms that define the standard, differences between simple and relational Darwin Core, how the standard has been implemented, and the community processes that are essential for maintenance and growth of the standard. We present case-study extensions of the Darwin Core into new research communities, including metagenomics and genetic resources. We close by showing how Darwin Core records are integrated to create new knowledge products documenting species distributions and changes due to environmental perturbations. Public Library of Science 2012-01-06 /pmc/articles/PMC3253084/ /pubmed/22238640 http://dx.doi.org/10.1371/journal.pone.0029715 Text en Wieczorek et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Wieczorek, John Bloom, David Guralnick, Robert Blum, Stan Döring, Markus Giovanni, Renato Robertson, Tim Vieglais, David Darwin Core: An Evolving Community-Developed Biodiversity Data Standard |
title | Darwin Core: An Evolving Community-Developed Biodiversity Data Standard |
title_full | Darwin Core: An Evolving Community-Developed Biodiversity Data Standard |
title_fullStr | Darwin Core: An Evolving Community-Developed Biodiversity Data Standard |
title_full_unstemmed | Darwin Core: An Evolving Community-Developed Biodiversity Data Standard |
title_short | Darwin Core: An Evolving Community-Developed Biodiversity Data Standard |
title_sort | darwin core: an evolving community-developed biodiversity data standard |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3253084/ https://www.ncbi.nlm.nih.gov/pubmed/22238640 http://dx.doi.org/10.1371/journal.pone.0029715 |
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