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Improving signal-to-noise ratio of structured light microscopy based on photon reassignment
In this paper, we report a method for 3D visualization of a biological specimen utilizing a structured light wide-field microscopic imaging system. This method improves on existing structured light imaging modalities by reassigning fluorescence photons generated from off-focal plane excitation, impr...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Optical Society of America
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3255338/ https://www.ncbi.nlm.nih.gov/pubmed/22254180 http://dx.doi.org/10.1364/BOE.3.000206 |
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author | Singh, Vijay Raj Choi, Heejin Yew, Elijah Y. S. Bhattacharya, Dipanjan Yuan, Luo Sheppard, Colin J. R. Rajapakse, Jagath C. Barbastathis, George So, Peter T. C. |
author_facet | Singh, Vijay Raj Choi, Heejin Yew, Elijah Y. S. Bhattacharya, Dipanjan Yuan, Luo Sheppard, Colin J. R. Rajapakse, Jagath C. Barbastathis, George So, Peter T. C. |
author_sort | Singh, Vijay Raj |
collection | PubMed |
description | In this paper, we report a method for 3D visualization of a biological specimen utilizing a structured light wide-field microscopic imaging system. This method improves on existing structured light imaging modalities by reassigning fluorescence photons generated from off-focal plane excitation, improving in-focus signal strength. Utilizing a maximum likelihood approach, we identify the most likely fluorophore distribution in 3D that will produce the observed image stacks under structured and uniform illumination using an iterative maximization algorithm. Our results show the optical sectioning capability of tissue specimens while mostly preserving image stack photon count, which is usually not achievable with other existing structured light imaging methods. |
format | Online Article Text |
id | pubmed-3255338 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Optical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-32553382012-01-17 Improving signal-to-noise ratio of structured light microscopy based on photon reassignment Singh, Vijay Raj Choi, Heejin Yew, Elijah Y. S. Bhattacharya, Dipanjan Yuan, Luo Sheppard, Colin J. R. Rajapakse, Jagath C. Barbastathis, George So, Peter T. C. Biomed Opt Express Microscopy In this paper, we report a method for 3D visualization of a biological specimen utilizing a structured light wide-field microscopic imaging system. This method improves on existing structured light imaging modalities by reassigning fluorescence photons generated from off-focal plane excitation, improving in-focus signal strength. Utilizing a maximum likelihood approach, we identify the most likely fluorophore distribution in 3D that will produce the observed image stacks under structured and uniform illumination using an iterative maximization algorithm. Our results show the optical sectioning capability of tissue specimens while mostly preserving image stack photon count, which is usually not achievable with other existing structured light imaging methods. Optical Society of America 2011-12-22 /pmc/articles/PMC3255338/ /pubmed/22254180 http://dx.doi.org/10.1364/BOE.3.000206 Text en ©2011 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially. |
spellingShingle | Microscopy Singh, Vijay Raj Choi, Heejin Yew, Elijah Y. S. Bhattacharya, Dipanjan Yuan, Luo Sheppard, Colin J. R. Rajapakse, Jagath C. Barbastathis, George So, Peter T. C. Improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
title | Improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
title_full | Improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
title_fullStr | Improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
title_full_unstemmed | Improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
title_short | Improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
title_sort | improving signal-to-noise ratio of structured light microscopy based on photon reassignment |
topic | Microscopy |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3255338/ https://www.ncbi.nlm.nih.gov/pubmed/22254180 http://dx.doi.org/10.1364/BOE.3.000206 |
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