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Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics

A novel procedure is presented which, by balancing elements and electric charge of biochemical reactions which occur at constant pH and pMg, allows assessing the thermodynamics properties of reaction Δ(r)G (′0), Δ(r)H (′0), Δ(r)S (′0) and the change in binding of hydrogen and magnesium ions of these...

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Detalles Bibliográficos
Autores principales: Sabatini, Antonio, Vacca, Alberto, Iotti, Stefano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3256155/
https://www.ncbi.nlm.nih.gov/pubmed/22247780
http://dx.doi.org/10.1371/journal.pone.0029529
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author Sabatini, Antonio
Vacca, Alberto
Iotti, Stefano
author_facet Sabatini, Antonio
Vacca, Alberto
Iotti, Stefano
author_sort Sabatini, Antonio
collection PubMed
description A novel procedure is presented which, by balancing elements and electric charge of biochemical reactions which occur at constant pH and pMg, allows assessing the thermodynamics properties of reaction Δ(r)G (′0), Δ(r)H (′0), Δ(r)S (′0) and the change in binding of hydrogen and magnesium ions of these reactions. This procedure of general applicability avoids the complex calculations required by the use of the Legendre transformed thermodynamic properties of formation Δ(f)G (′0), Δ(f)H (′0) and Δ(f)S (′0) hitherto considered an obligatory prerequisite to deal with the thermodynamics of biochemical reactions. As a consequence, the term “conditional” is proposed in substitution of “Legendre transformed” to indicate these thermodynamics properties. It is also shown that the thermodynamic potential G is fully adequate to give a criterion of spontaneous chemical change for all biochemical reactions and then that the use of the Legendre transformed G′ is unnecessary. The procedure proposed can be applied to any biochemical reaction, making possible to re-unify the two worlds of chemical and biochemical thermodynamics, which so far have been treated separately.
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spelling pubmed-32561552012-01-13 Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics Sabatini, Antonio Vacca, Alberto Iotti, Stefano PLoS One Research Article A novel procedure is presented which, by balancing elements and electric charge of biochemical reactions which occur at constant pH and pMg, allows assessing the thermodynamics properties of reaction Δ(r)G (′0), Δ(r)H (′0), Δ(r)S (′0) and the change in binding of hydrogen and magnesium ions of these reactions. This procedure of general applicability avoids the complex calculations required by the use of the Legendre transformed thermodynamic properties of formation Δ(f)G (′0), Δ(f)H (′0) and Δ(f)S (′0) hitherto considered an obligatory prerequisite to deal with the thermodynamics of biochemical reactions. As a consequence, the term “conditional” is proposed in substitution of “Legendre transformed” to indicate these thermodynamics properties. It is also shown that the thermodynamic potential G is fully adequate to give a criterion of spontaneous chemical change for all biochemical reactions and then that the use of the Legendre transformed G′ is unnecessary. The procedure proposed can be applied to any biochemical reaction, making possible to re-unify the two worlds of chemical and biochemical thermodynamics, which so far have been treated separately. Public Library of Science 2012-01-11 /pmc/articles/PMC3256155/ /pubmed/22247780 http://dx.doi.org/10.1371/journal.pone.0029529 Text en Sabatini et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sabatini, Antonio
Vacca, Alberto
Iotti, Stefano
Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics
title Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics
title_full Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics
title_fullStr Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics
title_full_unstemmed Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics
title_short Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics
title_sort balanced biochemical reactions: a new approach to unify chemical and biochemical thermodynamics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3256155/
https://www.ncbi.nlm.nih.gov/pubmed/22247780
http://dx.doi.org/10.1371/journal.pone.0029529
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