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Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor
The nociceptin/orphanin FQ (NOP) receptor is involved in a wide range of biological functions, including pain, anxiety, depression and drug abuse. Especially, its agonists have great potential to be developed into anxiolytics. In this work, both the ligand- and receptor-based three-dimensional quant...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3257111/ https://www.ncbi.nlm.nih.gov/pubmed/22272114 http://dx.doi.org/10.3390/ijms12128961 |
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author | Bao, Pingping Zhang, Xiaole Ren, Hong Li, Yan Mu, Zulin Zhang, Shuwei Li, Guohui Yang, Ling |
author_facet | Bao, Pingping Zhang, Xiaole Ren, Hong Li, Yan Mu, Zulin Zhang, Shuwei Li, Guohui Yang, Ling |
author_sort | Bao, Pingping |
collection | PubMed |
description | The nociceptin/orphanin FQ (NOP) receptor is involved in a wide range of biological functions, including pain, anxiety, depression and drug abuse. Especially, its agonists have great potential to be developed into anxiolytics. In this work, both the ligand- and receptor-based three-dimensional quantitative structure–activity relationship (3D-QSAR) studies were carried out using comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA) techniques on 103 N-substituted spiropiperidine analogues as NOP agonists. The resultant optimal ligand-based CoMSIA model exhibited Q(2) of 0.501, R(2)(ncv) of 0.912 and its predictive ability was validated by using an independent test set of 26 compounds which gave R(2)(pred) value of 0.818. In addition, docking analysis and molecular dynamics simulation (MD) were also applied to elucidate the probable binding modes of these agonists. Interpretation of the 3D contour maps, in the context of the topology of the active site of NOP, provided insight into the NOP-agonist interactions. The information obtained from this work can be used to accurately predict the binding affinity of related agonists and also facilitate the future rational design of novel agonists with improved activity. |
format | Online Article Text |
id | pubmed-3257111 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-32571112012-01-23 Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor Bao, Pingping Zhang, Xiaole Ren, Hong Li, Yan Mu, Zulin Zhang, Shuwei Li, Guohui Yang, Ling Int J Mol Sci Article The nociceptin/orphanin FQ (NOP) receptor is involved in a wide range of biological functions, including pain, anxiety, depression and drug abuse. Especially, its agonists have great potential to be developed into anxiolytics. In this work, both the ligand- and receptor-based three-dimensional quantitative structure–activity relationship (3D-QSAR) studies were carried out using comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA) techniques on 103 N-substituted spiropiperidine analogues as NOP agonists. The resultant optimal ligand-based CoMSIA model exhibited Q(2) of 0.501, R(2)(ncv) of 0.912 and its predictive ability was validated by using an independent test set of 26 compounds which gave R(2)(pred) value of 0.818. In addition, docking analysis and molecular dynamics simulation (MD) were also applied to elucidate the probable binding modes of these agonists. Interpretation of the 3D contour maps, in the context of the topology of the active site of NOP, provided insight into the NOP-agonist interactions. The information obtained from this work can be used to accurately predict the binding affinity of related agonists and also facilitate the future rational design of novel agonists with improved activity. Molecular Diversity Preservation International (MDPI) 2011-12-06 /pmc/articles/PMC3257111/ /pubmed/22272114 http://dx.doi.org/10.3390/ijms12128961 Text en © 2011 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Bao, Pingping Zhang, Xiaole Ren, Hong Li, Yan Mu, Zulin Zhang, Shuwei Li, Guohui Yang, Ling Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor |
title | Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor |
title_full | Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor |
title_fullStr | Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor |
title_full_unstemmed | Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor |
title_short | Structural Requirements of N-Substituted Spiropiperidine Analogues as Agonists of Nociceptin/Orphanin FQ Receptor |
title_sort | structural requirements of n-substituted spiropiperidine analogues as agonists of nociceptin/orphanin fq receptor |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3257111/ https://www.ncbi.nlm.nih.gov/pubmed/22272114 http://dx.doi.org/10.3390/ijms12128961 |
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