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A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals

BACKGROUND: Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their resulting complex experimental data should be properly evaluated, therefore reliable normal healthy control baseline values are indis...

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Autores principales: Gruden, Kristina, Hren, Matjaž, Herman, Ana, Blejec, Andrej, Albrecht, Tanja, Selbig, Joachim, Bauer, Chris, Schuchardt, Johannes, Or-Guil, Michal, Zupančič, Klemen, Švajger, Urban, Štabuc, Borut, Ihan, Alojz, Kopitar, Andreja Nataša, Ravnikar, Maja, Knežević, Miomir, Rožman, Primož, Jeras, Matjaž
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3257221/
https://www.ncbi.nlm.nih.gov/pubmed/22253695
http://dx.doi.org/10.1371/journal.pone.0028761
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author Gruden, Kristina
Hren, Matjaž
Herman, Ana
Blejec, Andrej
Albrecht, Tanja
Selbig, Joachim
Bauer, Chris
Schuchardt, Johannes
Or-Guil, Michal
Zupančič, Klemen
Švajger, Urban
Štabuc, Borut
Ihan, Alojz
Kopitar, Andreja Nataša
Ravnikar, Maja
Knežević, Miomir
Rožman, Primož
Jeras, Matjaž
author_facet Gruden, Kristina
Hren, Matjaž
Herman, Ana
Blejec, Andrej
Albrecht, Tanja
Selbig, Joachim
Bauer, Chris
Schuchardt, Johannes
Or-Guil, Michal
Zupančič, Klemen
Švajger, Urban
Štabuc, Borut
Ihan, Alojz
Kopitar, Andreja Nataša
Ravnikar, Maja
Knežević, Miomir
Rožman, Primož
Jeras, Matjaž
author_sort Gruden, Kristina
collection PubMed
description BACKGROUND: Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their resulting complex experimental data should be properly evaluated, therefore reliable normal healthy control baseline values are indispensable. METHODOLOGY/PRINCIPAL FINDINGS: To assess intra- and inter-individual variability of various biomarkers, peripheral blood of 16 age and gender equilibrated healthy volunteers was sampled on 3 different days within a period of one month. Complex “crossomics” analyses of plasma metabolite profiles, antibody concentrations and lymphocyte subset counts as well as whole genome expression profiling in CD4(+)T and NK cells were performed. Some of the observed age, gender and BMI dependences are in agreement with the existing knowledge, like negative correlation between sex hormone levels and age or BMI related increase in lipids and soluble sugars. Thus we can assume that the distribution of all 39.743 analysed markers is well representing the normal Caucasoid population. All lymphocyte subsets, 20% of metabolites and less than 10% of genes, were identified as highly variable in our dataset. CONCLUSIONS/SIGNIFICANCE: Our study shows that the intra-individual variability was at least two-fold lower compared to the inter-individual one at all investigated levels, showing the importance of personalised medicine approach from yet another perspective.
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spelling pubmed-32572212012-01-17 A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals Gruden, Kristina Hren, Matjaž Herman, Ana Blejec, Andrej Albrecht, Tanja Selbig, Joachim Bauer, Chris Schuchardt, Johannes Or-Guil, Michal Zupančič, Klemen Švajger, Urban Štabuc, Borut Ihan, Alojz Kopitar, Andreja Nataša Ravnikar, Maja Knežević, Miomir Rožman, Primož Jeras, Matjaž PLoS One Research Article BACKGROUND: Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their resulting complex experimental data should be properly evaluated, therefore reliable normal healthy control baseline values are indispensable. METHODOLOGY/PRINCIPAL FINDINGS: To assess intra- and inter-individual variability of various biomarkers, peripheral blood of 16 age and gender equilibrated healthy volunteers was sampled on 3 different days within a period of one month. Complex “crossomics” analyses of plasma metabolite profiles, antibody concentrations and lymphocyte subset counts as well as whole genome expression profiling in CD4(+)T and NK cells were performed. Some of the observed age, gender and BMI dependences are in agreement with the existing knowledge, like negative correlation between sex hormone levels and age or BMI related increase in lipids and soluble sugars. Thus we can assume that the distribution of all 39.743 analysed markers is well representing the normal Caucasoid population. All lymphocyte subsets, 20% of metabolites and less than 10% of genes, were identified as highly variable in our dataset. CONCLUSIONS/SIGNIFICANCE: Our study shows that the intra-individual variability was at least two-fold lower compared to the inter-individual one at all investigated levels, showing the importance of personalised medicine approach from yet another perspective. Public Library of Science 2012-01-12 /pmc/articles/PMC3257221/ /pubmed/22253695 http://dx.doi.org/10.1371/journal.pone.0028761 Text en Gruden et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Gruden, Kristina
Hren, Matjaž
Herman, Ana
Blejec, Andrej
Albrecht, Tanja
Selbig, Joachim
Bauer, Chris
Schuchardt, Johannes
Or-Guil, Michal
Zupančič, Klemen
Švajger, Urban
Štabuc, Borut
Ihan, Alojz
Kopitar, Andreja Nataša
Ravnikar, Maja
Knežević, Miomir
Rožman, Primož
Jeras, Matjaž
A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals
title A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals
title_full A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals
title_fullStr A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals
title_full_unstemmed A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals
title_short A “Crossomics” Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals
title_sort “crossomics” study analysing variability of different components in peripheral blood of healthy caucasoid individuals
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3257221/
https://www.ncbi.nlm.nih.gov/pubmed/22253695
http://dx.doi.org/10.1371/journal.pone.0028761
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