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A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures
Background: Computational modeling of the absorption, distribution, metabolism, and excretion of chemicals is now theoretically able to describe metabolic interactions in realistic mixtures of tens to hundreds of substances. That framework awaits validation. Objectives: Our objectives were to a) eva...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Institute of Environmental Health Sciences
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3261979/ https://www.ncbi.nlm.nih.gov/pubmed/21835728 http://dx.doi.org/10.1289/ehp.1103510 |
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author | Cheng, Shu Bois, Frederic Y. |
author_facet | Cheng, Shu Bois, Frederic Y. |
author_sort | Cheng, Shu |
collection | PubMed |
description | Background: Computational modeling of the absorption, distribution, metabolism, and excretion of chemicals is now theoretically able to describe metabolic interactions in realistic mixtures of tens to hundreds of substances. That framework awaits validation. Objectives: Our objectives were to a) evaluate the conditions of application of such a framework, b) confront the predictions of a physiologically integrated model of benzene, toluene, ethylbenzene, and m-xylene (BTEX) interactions with observed kinetics data on these substances in mixtures and, c) assess whether improving the mechanistic description has the potential to lead to better predictions of interactions. Methods: We developed three joint models of BTEX toxicokinetics and metabolism and calibrated them using Markov chain Monte Carlo simulations and single-substance exposure data. We then checked their predictive capabilities for metabolic interactions by comparison with mixture kinetic data. Results: The simplest joint model (BTEX interacting competitively for cytochrome P450 2E1 access) gives qualitatively correct and quantitatively acceptable predictions (with at most 50% deviations from the data). More complex models with two pathways or back-competition with metabolites have the potential to further improve predictions for BTEX mixtures. Conclusions: A systems biology approach to large-scale prediction of metabolic interactions is advantageous on several counts and technically feasible. However, ways to obtain the required parameters need to be further explored. |
format | Online Article Text |
id | pubmed-3261979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | National Institute of Environmental Health Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-32619792012-01-20 A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures Cheng, Shu Bois, Frederic Y. Environ Health Perspect Research Background: Computational modeling of the absorption, distribution, metabolism, and excretion of chemicals is now theoretically able to describe metabolic interactions in realistic mixtures of tens to hundreds of substances. That framework awaits validation. Objectives: Our objectives were to a) evaluate the conditions of application of such a framework, b) confront the predictions of a physiologically integrated model of benzene, toluene, ethylbenzene, and m-xylene (BTEX) interactions with observed kinetics data on these substances in mixtures and, c) assess whether improving the mechanistic description has the potential to lead to better predictions of interactions. Methods: We developed three joint models of BTEX toxicokinetics and metabolism and calibrated them using Markov chain Monte Carlo simulations and single-substance exposure data. We then checked their predictive capabilities for metabolic interactions by comparison with mixture kinetic data. Results: The simplest joint model (BTEX interacting competitively for cytochrome P450 2E1 access) gives qualitatively correct and quantitatively acceptable predictions (with at most 50% deviations from the data). More complex models with two pathways or back-competition with metabolites have the potential to further improve predictions for BTEX mixtures. Conclusions: A systems biology approach to large-scale prediction of metabolic interactions is advantageous on several counts and technically feasible. However, ways to obtain the required parameters need to be further explored. National Institute of Environmental Health Sciences 2011-08-11 2011-12 /pmc/articles/PMC3261979/ /pubmed/21835728 http://dx.doi.org/10.1289/ehp.1103510 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, ?Reproduced with permission from Environmental Health Perspectives?); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright. |
spellingShingle | Research Cheng, Shu Bois, Frederic Y. A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures |
title | A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures |
title_full | A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures |
title_fullStr | A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures |
title_full_unstemmed | A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures |
title_short | A Mechanistic Modeling Framework for Predicting Metabolic Interactions in Complex Mixtures |
title_sort | mechanistic modeling framework for predicting metabolic interactions in complex mixtures |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3261979/ https://www.ncbi.nlm.nih.gov/pubmed/21835728 http://dx.doi.org/10.1289/ehp.1103510 |
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