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Yeast one-hybrid assays for gene-centered human gene regulatory network mapping

Gateway-compatible yeast one-hybrid (Y1H) assays provide a convenient gene-centered (DNA-to-protein) approach to identify the repertoire of transcription factors that can bind a DNA sequence of interest. We present a set of Y1H resources, including clones for 988 of 1,434 (69%) predicted human trans...

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Autores principales: Reece-Hoyes, John S, Barutcu, A Rasim, McCord, Rachel Patton, Jeong, Jun Seop, Jiang, Lizhi, MacWilliams, Andrew, Yang, Xinping, Salehi-Ashtiani, Kourosh, Hill, David E, Blackshaw, Seth, Zhu, Heng, Dekker, Job, Walhout, Albertha J M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263363/
https://www.ncbi.nlm.nih.gov/pubmed/22037702
http://dx.doi.org/10.1038/nmeth.1764
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author Reece-Hoyes, John S
Barutcu, A Rasim
McCord, Rachel Patton
Jeong, Jun Seop
Jiang, Lizhi
MacWilliams, Andrew
Yang, Xinping
Salehi-Ashtiani, Kourosh
Hill, David E
Blackshaw, Seth
Zhu, Heng
Dekker, Job
Walhout, Albertha J M
author_facet Reece-Hoyes, John S
Barutcu, A Rasim
McCord, Rachel Patton
Jeong, Jun Seop
Jiang, Lizhi
MacWilliams, Andrew
Yang, Xinping
Salehi-Ashtiani, Kourosh
Hill, David E
Blackshaw, Seth
Zhu, Heng
Dekker, Job
Walhout, Albertha J M
author_sort Reece-Hoyes, John S
collection PubMed
description Gateway-compatible yeast one-hybrid (Y1H) assays provide a convenient gene-centered (DNA-to-protein) approach to identify the repertoire of transcription factors that can bind a DNA sequence of interest. We present a set of Y1H resources, including clones for 988 of 1,434 (69%) predicted human transcription factors, for the interrogation of interactions using either low or high-throughput settings. These approaches detect both known and novel interactions between human DNA regions and transcription factors.
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spelling pubmed-32633632012-06-01 Yeast one-hybrid assays for gene-centered human gene regulatory network mapping Reece-Hoyes, John S Barutcu, A Rasim McCord, Rachel Patton Jeong, Jun Seop Jiang, Lizhi MacWilliams, Andrew Yang, Xinping Salehi-Ashtiani, Kourosh Hill, David E Blackshaw, Seth Zhu, Heng Dekker, Job Walhout, Albertha J M Nat Methods Article Gateway-compatible yeast one-hybrid (Y1H) assays provide a convenient gene-centered (DNA-to-protein) approach to identify the repertoire of transcription factors that can bind a DNA sequence of interest. We present a set of Y1H resources, including clones for 988 of 1,434 (69%) predicted human transcription factors, for the interrogation of interactions using either low or high-throughput settings. These approaches detect both known and novel interactions between human DNA regions and transcription factors. 2011-10-30 /pmc/articles/PMC3263363/ /pubmed/22037702 http://dx.doi.org/10.1038/nmeth.1764 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Reece-Hoyes, John S
Barutcu, A Rasim
McCord, Rachel Patton
Jeong, Jun Seop
Jiang, Lizhi
MacWilliams, Andrew
Yang, Xinping
Salehi-Ashtiani, Kourosh
Hill, David E
Blackshaw, Seth
Zhu, Heng
Dekker, Job
Walhout, Albertha J M
Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
title Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
title_full Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
title_fullStr Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
title_full_unstemmed Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
title_short Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
title_sort yeast one-hybrid assays for gene-centered human gene regulatory network mapping
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263363/
https://www.ncbi.nlm.nih.gov/pubmed/22037702
http://dx.doi.org/10.1038/nmeth.1764
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