The BioMart interface to the eMouseAtlas gene expression database EMAGE

Here, we describe the BioMart interface to the eMouseAtlas gene expression database EMAGE. EMAGE is a spatiotemporal database of in situ gene expression patterns in the developing mouse embryo. BioMart provides a generic web query interface and programmable access using web services. The BioMart int...

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Detalles Bibliográficos
Autores principales: Stevenson, Peter, Richardson, Lorna, Venkataraman, Shanmugasundaram, Yang, Yiya, Baldock, Richard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263595/
https://www.ncbi.nlm.nih.gov/pubmed/21930504
http://dx.doi.org/10.1093/database/bar029
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author Stevenson, Peter
Richardson, Lorna
Venkataraman, Shanmugasundaram
Yang, Yiya
Baldock, Richard
author_facet Stevenson, Peter
Richardson, Lorna
Venkataraman, Shanmugasundaram
Yang, Yiya
Baldock, Richard
author_sort Stevenson, Peter
collection PubMed
description Here, we describe the BioMart interface to the eMouseAtlas gene expression database EMAGE. EMAGE is a spatiotemporal database of in situ gene expression patterns in the developing mouse embryo. BioMart provides a generic web query interface and programmable access using web services. The BioMart interface extends access to EMAGE via a powerful method of structuring complex queries and one with which users may already be familiar with from other BioMart implementations. The interface is structured into several data sets providing the user with comprehensive query access to the EMAGE data. The federated nature of BioMart allows scope for integration and cross querying of EMAGE with other similar BioMarts. Database URL: http://biomart.emouseatlas.org
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spelling pubmed-32635952012-01-23 The BioMart interface to the eMouseAtlas gene expression database EMAGE Stevenson, Peter Richardson, Lorna Venkataraman, Shanmugasundaram Yang, Yiya Baldock, Richard Database (Oxford) Original Article Here, we describe the BioMart interface to the eMouseAtlas gene expression database EMAGE. EMAGE is a spatiotemporal database of in situ gene expression patterns in the developing mouse embryo. BioMart provides a generic web query interface and programmable access using web services. The BioMart interface extends access to EMAGE via a powerful method of structuring complex queries and one with which users may already be familiar with from other BioMart implementations. The interface is structured into several data sets providing the user with comprehensive query access to the EMAGE data. The federated nature of BioMart allows scope for integration and cross querying of EMAGE with other similar BioMarts. Database URL: http://biomart.emouseatlas.org Oxford University Press 2011-09-16 /pmc/articles/PMC3263595/ /pubmed/21930504 http://dx.doi.org/10.1093/database/bar029 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Stevenson, Peter
Richardson, Lorna
Venkataraman, Shanmugasundaram
Yang, Yiya
Baldock, Richard
The BioMart interface to the eMouseAtlas gene expression database EMAGE
title The BioMart interface to the eMouseAtlas gene expression database EMAGE
title_full The BioMart interface to the eMouseAtlas gene expression database EMAGE
title_fullStr The BioMart interface to the eMouseAtlas gene expression database EMAGE
title_full_unstemmed The BioMart interface to the eMouseAtlas gene expression database EMAGE
title_short The BioMart interface to the eMouseAtlas gene expression database EMAGE
title_sort biomart interface to the emouseatlas gene expression database emage
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263595/
https://www.ncbi.nlm.nih.gov/pubmed/21930504
http://dx.doi.org/10.1093/database/bar029
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