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Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267702/ https://www.ncbi.nlm.nih.gov/pubmed/22142333 http://dx.doi.org/10.1186/1471-2350-12-156 |
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author | Brisbin, Abra G Asmann, Yan W Song, Honglin Tsai, Ya-Yu Aakre, Jeremiah A Yang, Ping Jenkins, Robert B Pharoah, Paul Schumacher, Fredrick Conti, David V Duggan, David J Jenkins, Mark Hopper, John Gallinger, Steven Newcomb, Polly Casey, Graham Sellers, Thomas A Fridley, Brooke L |
author_facet | Brisbin, Abra G Asmann, Yan W Song, Honglin Tsai, Ya-Yu Aakre, Jeremiah A Yang, Ping Jenkins, Robert B Pharoah, Paul Schumacher, Fredrick Conti, David V Duggan, David J Jenkins, Mark Hopper, John Gallinger, Steven Newcomb, Polly Casey, Graham Sellers, Thomas A Fridley, Brooke L |
author_sort | Brisbin, Abra G |
collection | PubMed |
description | BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24. METHODS: In this study, we completed a meta-analysis of results from nine genome-wide association studies for seven types of solid-tumor cancers (breast, prostate, pancreatic, lung, ovarian, colon, and glioma) to identify additional associations that were not apparent in any individual study. RESULTS: Fifteen SNPs in the 8q24 region had meta-analysis p-values < 1E-04. In particular, the region consisting of 120,576,000-120,627,000 bp contained 7 SNPs with p-values < 1.0E-4, including rs6993464 (p = 1.25E-07). This association lies in the region between two genes, NOV and ENPP2, which have been shown to play a role in tumor development and motility. An additional region consisting of 5 markers from 128,478,000 bp - 128,524,000 (around gene POU5F1B) had p-values < 1E-04, including rs6983267, which had the smallest p-value (p = 6.34E-08). This result replicates previous reports of association between rs6983267 and prostate and colon cancer. CONCLUSIONS: Further research in this area is warranted as these results demonstrate that the chromosomal region 8q24 may contain a locus that influences general cancer susceptibility between 120,576 and 120,630 kb. |
format | Online Article Text |
id | pubmed-3267702 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-32677022012-01-30 Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development Brisbin, Abra G Asmann, Yan W Song, Honglin Tsai, Ya-Yu Aakre, Jeremiah A Yang, Ping Jenkins, Robert B Pharoah, Paul Schumacher, Fredrick Conti, David V Duggan, David J Jenkins, Mark Hopper, John Gallinger, Steven Newcomb, Polly Casey, Graham Sellers, Thomas A Fridley, Brooke L BMC Med Genet Research Article BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24. METHODS: In this study, we completed a meta-analysis of results from nine genome-wide association studies for seven types of solid-tumor cancers (breast, prostate, pancreatic, lung, ovarian, colon, and glioma) to identify additional associations that were not apparent in any individual study. RESULTS: Fifteen SNPs in the 8q24 region had meta-analysis p-values < 1E-04. In particular, the region consisting of 120,576,000-120,627,000 bp contained 7 SNPs with p-values < 1.0E-4, including rs6993464 (p = 1.25E-07). This association lies in the region between two genes, NOV and ENPP2, which have been shown to play a role in tumor development and motility. An additional region consisting of 5 markers from 128,478,000 bp - 128,524,000 (around gene POU5F1B) had p-values < 1E-04, including rs6983267, which had the smallest p-value (p = 6.34E-08). This result replicates previous reports of association between rs6983267 and prostate and colon cancer. CONCLUSIONS: Further research in this area is warranted as these results demonstrate that the chromosomal region 8q24 may contain a locus that influences general cancer susceptibility between 120,576 and 120,630 kb. BioMed Central 2011-12-05 /pmc/articles/PMC3267702/ /pubmed/22142333 http://dx.doi.org/10.1186/1471-2350-12-156 Text en Copyright ©2011 Brisbin et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Brisbin, Abra G Asmann, Yan W Song, Honglin Tsai, Ya-Yu Aakre, Jeremiah A Yang, Ping Jenkins, Robert B Pharoah, Paul Schumacher, Fredrick Conti, David V Duggan, David J Jenkins, Mark Hopper, John Gallinger, Steven Newcomb, Polly Casey, Graham Sellers, Thomas A Fridley, Brooke L Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development |
title | Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development |
title_full | Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development |
title_fullStr | Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development |
title_full_unstemmed | Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development |
title_short | Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development |
title_sort | meta-analysis of 8q24 for seven cancers reveals a locus between nov and enpp2 associated with cancer development |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267702/ https://www.ncbi.nlm.nih.gov/pubmed/22142333 http://dx.doi.org/10.1186/1471-2350-12-156 |
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