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Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development

BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24...

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Autores principales: Brisbin, Abra G, Asmann, Yan W, Song, Honglin, Tsai, Ya-Yu, Aakre, Jeremiah A, Yang, Ping, Jenkins, Robert B, Pharoah, Paul, Schumacher, Fredrick, Conti, David V, Duggan, David J, Jenkins, Mark, Hopper, John, Gallinger, Steven, Newcomb, Polly, Casey, Graham, Sellers, Thomas A, Fridley, Brooke L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267702/
https://www.ncbi.nlm.nih.gov/pubmed/22142333
http://dx.doi.org/10.1186/1471-2350-12-156
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author Brisbin, Abra G
Asmann, Yan W
Song, Honglin
Tsai, Ya-Yu
Aakre, Jeremiah A
Yang, Ping
Jenkins, Robert B
Pharoah, Paul
Schumacher, Fredrick
Conti, David V
Duggan, David J
Jenkins, Mark
Hopper, John
Gallinger, Steven
Newcomb, Polly
Casey, Graham
Sellers, Thomas A
Fridley, Brooke L
author_facet Brisbin, Abra G
Asmann, Yan W
Song, Honglin
Tsai, Ya-Yu
Aakre, Jeremiah A
Yang, Ping
Jenkins, Robert B
Pharoah, Paul
Schumacher, Fredrick
Conti, David V
Duggan, David J
Jenkins, Mark
Hopper, John
Gallinger, Steven
Newcomb, Polly
Casey, Graham
Sellers, Thomas A
Fridley, Brooke L
author_sort Brisbin, Abra G
collection PubMed
description BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24. METHODS: In this study, we completed a meta-analysis of results from nine genome-wide association studies for seven types of solid-tumor cancers (breast, prostate, pancreatic, lung, ovarian, colon, and glioma) to identify additional associations that were not apparent in any individual study. RESULTS: Fifteen SNPs in the 8q24 region had meta-analysis p-values < 1E-04. In particular, the region consisting of 120,576,000-120,627,000 bp contained 7 SNPs with p-values < 1.0E-4, including rs6993464 (p = 1.25E-07). This association lies in the region between two genes, NOV and ENPP2, which have been shown to play a role in tumor development and motility. An additional region consisting of 5 markers from 128,478,000 bp - 128,524,000 (around gene POU5F1B) had p-values < 1E-04, including rs6983267, which had the smallest p-value (p = 6.34E-08). This result replicates previous reports of association between rs6983267 and prostate and colon cancer. CONCLUSIONS: Further research in this area is warranted as these results demonstrate that the chromosomal region 8q24 may contain a locus that influences general cancer susceptibility between 120,576 and 120,630 kb.
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spelling pubmed-32677022012-01-30 Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development Brisbin, Abra G Asmann, Yan W Song, Honglin Tsai, Ya-Yu Aakre, Jeremiah A Yang, Ping Jenkins, Robert B Pharoah, Paul Schumacher, Fredrick Conti, David V Duggan, David J Jenkins, Mark Hopper, John Gallinger, Steven Newcomb, Polly Casey, Graham Sellers, Thomas A Fridley, Brooke L BMC Med Genet Research Article BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24. METHODS: In this study, we completed a meta-analysis of results from nine genome-wide association studies for seven types of solid-tumor cancers (breast, prostate, pancreatic, lung, ovarian, colon, and glioma) to identify additional associations that were not apparent in any individual study. RESULTS: Fifteen SNPs in the 8q24 region had meta-analysis p-values < 1E-04. In particular, the region consisting of 120,576,000-120,627,000 bp contained 7 SNPs with p-values < 1.0E-4, including rs6993464 (p = 1.25E-07). This association lies in the region between two genes, NOV and ENPP2, which have been shown to play a role in tumor development and motility. An additional region consisting of 5 markers from 128,478,000 bp - 128,524,000 (around gene POU5F1B) had p-values < 1E-04, including rs6983267, which had the smallest p-value (p = 6.34E-08). This result replicates previous reports of association between rs6983267 and prostate and colon cancer. CONCLUSIONS: Further research in this area is warranted as these results demonstrate that the chromosomal region 8q24 may contain a locus that influences general cancer susceptibility between 120,576 and 120,630 kb. BioMed Central 2011-12-05 /pmc/articles/PMC3267702/ /pubmed/22142333 http://dx.doi.org/10.1186/1471-2350-12-156 Text en Copyright ©2011 Brisbin et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Brisbin, Abra G
Asmann, Yan W
Song, Honglin
Tsai, Ya-Yu
Aakre, Jeremiah A
Yang, Ping
Jenkins, Robert B
Pharoah, Paul
Schumacher, Fredrick
Conti, David V
Duggan, David J
Jenkins, Mark
Hopper, John
Gallinger, Steven
Newcomb, Polly
Casey, Graham
Sellers, Thomas A
Fridley, Brooke L
Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
title Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
title_full Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
title_fullStr Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
title_full_unstemmed Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
title_short Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development
title_sort meta-analysis of 8q24 for seven cancers reveals a locus between nov and enpp2 associated with cancer development
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267702/
https://www.ncbi.nlm.nih.gov/pubmed/22142333
http://dx.doi.org/10.1186/1471-2350-12-156
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