Cargando…

A Deeply Branching Thermophilic Bacterium with an Ancient Acetyl-CoA Pathway Dominates a Subsurface Ecosystem

A nearly complete genome sequence of Candidatus ‘Acetothermum autotrophicum’, a presently uncultivated bacterium in candidate division OP1, was revealed by metagenomic analysis of a subsurface thermophilic microbial mat community. Phylogenetic analysis based on the concatenated sequences of proteins...

Descripción completa

Detalles Bibliográficos
Autores principales:	Takami, Hideto, Noguchi, Hideki, Takaki, Yoshihiro, Uchiyama, Ikuo, Toyoda, Atsushi, Nishi, Shinro, Chee, Gab-Joo, Arai, Wataru, Nunoura, Takuro, Itoh, Takehiko, Hattori, Masahira, Takai, Ken
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267732/ https://www.ncbi.nlm.nih.gov/pubmed/22303444 http://dx.doi.org/10.1371/journal.pone.0030559

Ejemplares similares

Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group
por: Nunoura, Takuro, et al.
Publicado: (2011)

Complete genome sequence and expression profile of the commercial lytic enzyme producer Lysobacter enzymogenes M497-1
por: Takami, Hideto, et al.
Publicado: (2017)

Draft Genome Sequence of Mariprofundus micogutta Strain ET2
por: Makita, Hiroko, et al.
Publicado: (2018)

High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes
por: Kawai, Mikihiko, et al.
Publicado: (2014)

Library Construction from Subnanogram DNA for Pelagic Sea Water and Deep-Sea Sediments
por: Hirai, Miho, et al.
Publicado: (2017)

Genomic Heterogeneity in a Natural Archaeal Population Suggests a Model of tRNA Gene Disruption
por: Sugahara, Junichi, et al.
Publicado: (2012)

Quantitative Viral Community DNA Analysis Reveals the Dominance of Single-Stranded DNA Viruses in Offshore Upper Bathyal Sediment from Tohoku, Japan
por: Yoshida, Mitsuhiro, et al.
Publicado: (2018)

Insights into the Methanogenic Population and Potential in Subsurface Marine Sediments Based on Coenzyme F430 as a Function-Specific Biomarker
por: Kaneko, Masanori, et al.
Publicado: (2021)

Drivers of Bacterial α- and β-Diversity Patterns and Functioning in Subsurface Hadal Sediments
por: Rastelli, Eugenio, et al.
Publicado: (2019)

Metagenomic Analysis of Viral Communities in (Hado)Pelagic Sediments
por: Yoshida, Mitsuhiro, et al.
Publicado: (2013)

Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes
por: Kurokawa, Ken, et al.
Publicado: (2007)

Complete Genomic Sequence of the Thermophilic Hydrogen-Oxidizing Methanogen Methanothermobacter tenebrarum Strain RMAS(T)
por: Nakamura, Kohei, et al.
Publicado: (2022)

Bacterial Lifestyle in a Deep-sea Hydrothermal Vent Chimney Revealed by the Genome Sequence of the Thermophilic Bacterium Deferribacter desulfuricans SSM1
por: Takaki, Yoshihiro, et al.
Publicado: (2010)

Draft Genome Sequences of Thermophiles Isolated from Yates Shaft, a Deep-Subsurface Environment
por: Singh, Nitin K., et al.
Publicado: (2017)

Genomic insights into phage-host interaction in the deep-sea chemolithoautotrophic Campylobacterota, Nitratiruptor
por: Yoshida-Takashima, Yukari, et al.
Publicado: (2022)

Isolation and Characterization of a Thermophilic, Obligately Anaerobic and Heterotrophic Marine Chloroflexi Bacterium from a Chloroflexi-dominated Microbial Community Associated with a Japanese Shallow Hydrothermal System, and Proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.
por: Nunoura, Takuro, et al.
Publicado: (2013)

Microbial Diversity in Deep-sea Methane Seep Sediments Presented by SSU rRNA Gene Tag Sequencing
por: Nunoura, Takuro, et al.
Publicado: (2012)

FLDS: A Comprehensive dsRNA Sequencing Method for Intracellular RNA Virus Surveillance
por: Urayama, Syun-ichi, et al.
Publicado: (2016)

Functional Classification of Uncultured “Candidatus Caldiarchaeum subterraneum” Using the Maple System
por: Takami, Hideto, et al.
Publicado: (2015)

Draft Genome Sequencing and Comparative Analysis of Aspergillus sojae NBRC4239
por: Sato, Atsushi, et al.
Publicado: (2011)

The physiological potential of anammox bacteria as revealed by their core genome structure
por: Okubo, Takashi, et al.
Publicado: (2020)

Complete Genome Sequence of a Novel RNA Virus Identified from a Deep-Sea Animal, Osedax japonicus
por: Urayama, Syun-ichi, et al.
Publicado: (2018)

dsRNA-seq Reveals Novel RNA Virus and Virus-Like Putative Complete Genome Sequences from Hymeniacidon sp. Sponge
por: Urayama, Syun-ichi, et al.
Publicado: (2020)

Hybrid genome de novo assembly with methylome analysis of the anaerobic thermophilic subsurface bacterium Thermanaerosceptrum fracticalcis strain DRI-13(T)
por: Murphy, Trevor R., et al.
Publicado: (2021)

Physiological and Genomic Features of a Novel Sulfur-Oxidizing Gammaproteobacterium Belonging to a Previously Uncultivated Symbiotic Lineage Isolated from a Hydrothermal Vent
por: Nunoura, Takuro, et al.
Publicado: (2014)

Brookhaven: Deeply-bound hypernuclei
Publicado: (1988)

Peering deeply inside the branch
por: Cai, Liang, et al.
Publicado: (2008)

Physics funding deeply cut
Publicado: (2009)

Chromosome Painting In Silico in a Bacterial Species Reveals Fine Population Structure
por: Yahara, Koji, et al.
Publicado: (2013)

Complete Genome Sequence of Altererythrobacter sp. Strain B11, an Aromatic Monomer-Degrading Bacterium, Isolated from Deep-Sea Sediment under the Seabed off Kashima, Japan
por: Maeda, Allyn H., et al.
Publicado: (2018)

Metagenomic Analysis of Five Phylogenetically Distant Anammox Bacterial Enrichment Cultures
por: Oshiki, Mamoru, et al.
Publicado: (2022)

Draft Genome Sequence of Tepidibacillus decaturensis Strain Z9, an Anaerobic, Moderately Thermophilic, and Heterotrophic Bacterium from the Deep Subsurface of the Illinois Basin, USA
por: Dong, Yiran, et al.
Publicado: (2016)

Who owns the German subsurface? Ownership and sustainable governance of the subsurface in Germany
por: Berger, Frederic, et al.
Publicado: (2021)

RNA Viral Metagenome Analysis of Subnanogram dsRNA Using Fragmented and Primer Ligated dsRNA Sequencing (FLDS)
por: Hirai, Miho, et al.
Publicado: (2021)

RNA Virosphere in a Marine Zooplankton Community in the Subtropical Western North Pacific
por: Hirai, Junya, et al.
Publicado: (2022)

The First Identification of a Narnavirus in Bigyra, a Marine Protist
por: Chiba, Yuto, et al.
Publicado: (2023)

Genome Sequence of the Lager Brewing Yeast, an Interspecies Hybrid
por: Nakao, Yoshihiro, et al.
Publicado: (2009)

Diverse DNA modification in marine prokaryotic and viral communities
por: Hiraoka, Satoshi, et al.
Publicado: (2022)

Stochastic subsurface hydrology
por: Gelhar, Lynn W.
Publicado: (1993)

GSI Darmstadt: Deeply bound pions in lead
Publicado: (1996)

Cannot write session to /tmp/vufind_sessions/sess_cdsut1j5ls1fac68deofcrmchs