SOAPsplice: Genome-Wide ab initio Detection of Splice Junctions from RNA-Seq Data

RNA-Seq, a method using next generation sequencing technologies to sequence the transcriptome, facilitates genome-wide analysis of splice junction sites. In this paper, we introduce SOAPsplice, a robust tool to detect splice junctions using RNA-Seq data without using any information of known splice...

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Detalles Bibliográficos
Autores principales: Huang, Songbo, Zhang, Jinbo, Li, Ruiqiang, Zhang, Wenqian, He, Zengquan, Lam, Tak-Wah, Peng, Zhiyu, Yiu, Siu-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Research Foundation 2011
Materias:
Genetics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3268599/
https://www.ncbi.nlm.nih.gov/pubmed/22303342
http://dx.doi.org/10.3389/fgene.2011.00046

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