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Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy
Dynamic force spectroscopy (DFS) makes it possible to investigate specific interactions between two molecules such as ligand-receptor pairs at the single-molecule level. In the DFS method based on the Bell-Evans model, the unbinding force applied to a molecular bond is increased at a constant rate,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269697/ https://www.ncbi.nlm.nih.gov/pubmed/22312263 http://dx.doi.org/10.3390/ijms13010453 |
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author | Taninaka, Atsushi Hirano, Yuuichi Takeuchi, Osamu Shigekawa, Hidemi |
author_facet | Taninaka, Atsushi Hirano, Yuuichi Takeuchi, Osamu Shigekawa, Hidemi |
author_sort | Taninaka, Atsushi |
collection | PubMed |
description | Dynamic force spectroscopy (DFS) makes it possible to investigate specific interactions between two molecules such as ligand-receptor pairs at the single-molecule level. In the DFS method based on the Bell-Evans model, the unbinding force applied to a molecular bond is increased at a constant rate, and the force required to rupture the molecular bond is measured. By analyzing the relationship between the modal rupture force and the logarithm of the loading rate, microscopic potential barrier landscapes and the lifetimes of bonds can be obtained. However, the results obtained, for example, in the case of streptavidin/biotin complexes, have differed among previous studies and some results have been inconsistent with theoretical predictions. In this study, using an atomic force microscopy technique that enables the precise analysis of molecular interactions on the basis of DFS, we investigated the effect of the sampling rate on DFS analysis. The shape of rupture force histograms, for example, was significantly deformed at a sampling rate of 1 kHz in comparison with that of histograms obtained at 100 kHz, indicating the fundamental importance of ensuring suitable experimental conditions for further advances in the DFS method. |
format | Online Article Text |
id | pubmed-3269697 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-32696972012-02-06 Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy Taninaka, Atsushi Hirano, Yuuichi Takeuchi, Osamu Shigekawa, Hidemi Int J Mol Sci Article Dynamic force spectroscopy (DFS) makes it possible to investigate specific interactions between two molecules such as ligand-receptor pairs at the single-molecule level. In the DFS method based on the Bell-Evans model, the unbinding force applied to a molecular bond is increased at a constant rate, and the force required to rupture the molecular bond is measured. By analyzing the relationship between the modal rupture force and the logarithm of the loading rate, microscopic potential barrier landscapes and the lifetimes of bonds can be obtained. However, the results obtained, for example, in the case of streptavidin/biotin complexes, have differed among previous studies and some results have been inconsistent with theoretical predictions. In this study, using an atomic force microscopy technique that enables the precise analysis of molecular interactions on the basis of DFS, we investigated the effect of the sampling rate on DFS analysis. The shape of rupture force histograms, for example, was significantly deformed at a sampling rate of 1 kHz in comparison with that of histograms obtained at 100 kHz, indicating the fundamental importance of ensuring suitable experimental conditions for further advances in the DFS method. Molecular Diversity Preservation International (MDPI) 2011-12-29 /pmc/articles/PMC3269697/ /pubmed/22312263 http://dx.doi.org/10.3390/ijms13010453 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Taninaka, Atsushi Hirano, Yuuichi Takeuchi, Osamu Shigekawa, Hidemi Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy |
title | Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy |
title_full | Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy |
title_fullStr | Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy |
title_full_unstemmed | Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy |
title_short | Force Measurement Enabling Precise Analysis by Dynamic Force Spectroscopy |
title_sort | force measurement enabling precise analysis by dynamic force spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269697/ https://www.ncbi.nlm.nih.gov/pubmed/22312263 http://dx.doi.org/10.3390/ijms13010453 |
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