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A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China

The genus Luculia Sweet contains about five species of small trees or shrubs and is a member of the family Rubiaceae (tribe Cinchoneae). Luculia yunnanensis is an endangered ornamental shrub endemic to southwest China. Only two natural populations of L. yunnanensis exist in the wild according to our...

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Detalles Bibliográficos
Autores principales: Ma, Hong, Wang, Lan, Wan, Youming, Li, Hongzhe, Li, Zhenghong, Liu, Xiuxian, Liang, Ning, Li, Wenjuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269703/
https://www.ncbi.nlm.nih.gov/pubmed/22312269
http://dx.doi.org/10.3390/ijms13010534
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author Ma, Hong
Wang, Lan
Wan, Youming
Li, Hongzhe
Li, Zhenghong
Liu, Xiuxian
Liang, Ning
Li, Wenjuan
author_facet Ma, Hong
Wang, Lan
Wan, Youming
Li, Hongzhe
Li, Zhenghong
Liu, Xiuxian
Liang, Ning
Li, Wenjuan
author_sort Ma, Hong
collection PubMed
description The genus Luculia Sweet contains about five species of small trees or shrubs and is a member of the family Rubiaceae (tribe Cinchoneae). Luculia yunnanensis is an endangered ornamental shrub endemic to southwest China. Only two natural populations of L. yunnanensis exist in the wild according to our field investigation. It can be inferred that L. yunnanensis is facing a very high risk of extinction in the wild and an urgent conservation strategy is required. By using a modified biotin-sterptavidin capture method, 24 primer sets were identified in two wild populations. Of these primers, 11 displayed polymorphisms and 13 were monomorphic. The number of alleles per locus ranged from two to four, values for observed and expected heterozygosities ranged from 0.000 to 0.833 and from 0.431 to 0.771, with averages of 0.389 and 0.614, respectively. These markers will be useful for further investigation of conservation of resources, selecting parental types in cross-breeding, evolution of this species at the molecular level and related research in Luculia species.
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spelling pubmed-32697032012-02-06 A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China Ma, Hong Wang, Lan Wan, Youming Li, Hongzhe Li, Zhenghong Liu, Xiuxian Liang, Ning Li, Wenjuan Int J Mol Sci Short Note The genus Luculia Sweet contains about five species of small trees or shrubs and is a member of the family Rubiaceae (tribe Cinchoneae). Luculia yunnanensis is an endangered ornamental shrub endemic to southwest China. Only two natural populations of L. yunnanensis exist in the wild according to our field investigation. It can be inferred that L. yunnanensis is facing a very high risk of extinction in the wild and an urgent conservation strategy is required. By using a modified biotin-sterptavidin capture method, 24 primer sets were identified in two wild populations. Of these primers, 11 displayed polymorphisms and 13 were monomorphic. The number of alleles per locus ranged from two to four, values for observed and expected heterozygosities ranged from 0.000 to 0.833 and from 0.431 to 0.771, with averages of 0.389 and 0.614, respectively. These markers will be useful for further investigation of conservation of resources, selecting parental types in cross-breeding, evolution of this species at the molecular level and related research in Luculia species. Molecular Diversity Preservation International (MDPI) 2012-01-04 /pmc/articles/PMC3269703/ /pubmed/22312269 http://dx.doi.org/10.3390/ijms13010534 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Short Note
Ma, Hong
Wang, Lan
Wan, Youming
Li, Hongzhe
Li, Zhenghong
Liu, Xiuxian
Liang, Ning
Li, Wenjuan
A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China
title A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China
title_full A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China
title_fullStr A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China
title_full_unstemmed A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China
title_short A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China
title_sort set of novel microsatellite markers developed for luculia yunnanensis (rubiaceae), an endangered plant endemic to yunnan, china
topic Short Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269703/
https://www.ncbi.nlm.nih.gov/pubmed/22312269
http://dx.doi.org/10.3390/ijms13010534
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