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Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1

Mutant D311E and K344R were constructed using site-directed mutagenesis to introduce an additional ion pair at the inter-loop and the intra-loop, respectively, to determine the effect of ion pairs on the stability of T1 lipase isolated from Geobacillus zalihae. A series of purification steps was app...

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Autores principales: Ruslan, Rudzanna, Abd. Rahman, Raja Noor Zaliha Raja, Leow, Thean Chor, Ali, Mohd Shukuri Mohamad, Basri, Mahiran, Salleh, Abu Bakar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269730/
https://www.ncbi.nlm.nih.gov/pubmed/22312296
http://dx.doi.org/10.3390/ijms13010943
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author Ruslan, Rudzanna
Abd. Rahman, Raja Noor Zaliha Raja
Leow, Thean Chor
Ali, Mohd Shukuri Mohamad
Basri, Mahiran
Salleh, Abu Bakar
author_facet Ruslan, Rudzanna
Abd. Rahman, Raja Noor Zaliha Raja
Leow, Thean Chor
Ali, Mohd Shukuri Mohamad
Basri, Mahiran
Salleh, Abu Bakar
author_sort Ruslan, Rudzanna
collection PubMed
description Mutant D311E and K344R were constructed using site-directed mutagenesis to introduce an additional ion pair at the inter-loop and the intra-loop, respectively, to determine the effect of ion pairs on the stability of T1 lipase isolated from Geobacillus zalihae. A series of purification steps was applied, and the pure lipases of T1, D311E and K344R were obtained. The wild-type and mutant lipases were analyzed using circular dichroism. The T(m) for T1 lipase, D311E lipase and K344R lipase were approximately 68.52 °C, 70.59 °C and 68.54 °C, respectively. Mutation at D311 increases the stability of T1 lipase and exhibited higher T(m) as compared to the wild-type and K344R. Based on the above, D311E lipase was chosen for further study. D311E lipase was successfully crystallized using the sitting drop vapor diffusion method. The crystal was diffracted at 2.1 Å using an in-house X-ray beam and belonged to the monoclinic space group C2 with the unit cell parameters a = 117.32 Å, b = 81.16 Å and c = 100.14 Å. Structural analysis showed the existence of an additional ion pair around E311 in the structure of D311E. The additional ion pair in D311E may regulate the stability of this mutant lipase at high temperatures as predicted in silico and spectroscopically.
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spelling pubmed-32697302012-02-06 Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1 Ruslan, Rudzanna Abd. Rahman, Raja Noor Zaliha Raja Leow, Thean Chor Ali, Mohd Shukuri Mohamad Basri, Mahiran Salleh, Abu Bakar Int J Mol Sci Article Mutant D311E and K344R were constructed using site-directed mutagenesis to introduce an additional ion pair at the inter-loop and the intra-loop, respectively, to determine the effect of ion pairs on the stability of T1 lipase isolated from Geobacillus zalihae. A series of purification steps was applied, and the pure lipases of T1, D311E and K344R were obtained. The wild-type and mutant lipases were analyzed using circular dichroism. The T(m) for T1 lipase, D311E lipase and K344R lipase were approximately 68.52 °C, 70.59 °C and 68.54 °C, respectively. Mutation at D311 increases the stability of T1 lipase and exhibited higher T(m) as compared to the wild-type and K344R. Based on the above, D311E lipase was chosen for further study. D311E lipase was successfully crystallized using the sitting drop vapor diffusion method. The crystal was diffracted at 2.1 Å using an in-house X-ray beam and belonged to the monoclinic space group C2 with the unit cell parameters a = 117.32 Å, b = 81.16 Å and c = 100.14 Å. Structural analysis showed the existence of an additional ion pair around E311 in the structure of D311E. The additional ion pair in D311E may regulate the stability of this mutant lipase at high temperatures as predicted in silico and spectroscopically. Molecular Diversity Preservation International (MDPI) 2012-01-17 /pmc/articles/PMC3269730/ /pubmed/22312296 http://dx.doi.org/10.3390/ijms13010943 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Ruslan, Rudzanna
Abd. Rahman, Raja Noor Zaliha Raja
Leow, Thean Chor
Ali, Mohd Shukuri Mohamad
Basri, Mahiran
Salleh, Abu Bakar
Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1
title Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1
title_full Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1
title_fullStr Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1
title_full_unstemmed Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1
title_short Improvement of Thermal Stability via Outer-Loop Ion Pair Interaction of Mutated T1 Lipase from Geobacillus zalihae Strain T1
title_sort improvement of thermal stability via outer-loop ion pair interaction of mutated t1 lipase from geobacillus zalihae strain t1
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3269730/
https://www.ncbi.nlm.nih.gov/pubmed/22312296
http://dx.doi.org/10.3390/ijms13010943
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