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A System for Incubations at High Gas Partial Pressure

High-pressure is a key feature of deep subsurface environments. High partial pressure of dissolved gasses plays an important role in microbial metabolism, because thermodynamic feasibility of many reactions depends on the concentration of reactants. For gases, this is controlled by their partial pre...

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Autores principales: Sauer, Patrick, Glombitza, Clemens, Kallmeyer, Jens
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Research Foundation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271276/
https://www.ncbi.nlm.nih.gov/pubmed/22347218
http://dx.doi.org/10.3389/fmicb.2012.00025
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author Sauer, Patrick
Glombitza, Clemens
Kallmeyer, Jens
author_facet Sauer, Patrick
Glombitza, Clemens
Kallmeyer, Jens
author_sort Sauer, Patrick
collection PubMed
description High-pressure is a key feature of deep subsurface environments. High partial pressure of dissolved gasses plays an important role in microbial metabolism, because thermodynamic feasibility of many reactions depends on the concentration of reactants. For gases, this is controlled by their partial pressure, which can exceed 1 MPa at in situ conditions. Therefore, high hydrostatic pressure alone is not sufficient to recreate true deep subsurface in situ conditions, but the partial pressure of dissolved gasses has to be controlled as well. We developed an incubation system that allows for incubations at hydrostatic pressure up to 60 MPa, temperatures up to 120°C, and at high gas partial pressure. The composition and partial pressure of gasses can be manipulated during the experiment. To keep costs low, the system is mainly made from off-the-shelf components with only very few custom-made parts. A flexible and inert PVDF (polyvinylidene fluoride) incubator sleeve, which is almost impermeable for gases, holds the sample and separates it from the pressure fluid. The flexibility of the incubator sleeve allows for sub-sampling of the medium without loss of pressure. Experiments can be run in both static and flow-through mode. The incubation system described here is usable for versatile purposes, not only the incubation of microorganisms and determination of growth rates, but also for chemical degradation or extraction experiments under high gas saturation, e.g., fluid–gas–rock-interactions in relation to carbon dioxide sequestration. As an application of the system we extracted organic compounds from sub-bituminous coal using H(2)O as well as a H(2)O–CO(2) mixture at elevated temperature (90°C) and pressure (5 MPa). Subsamples were taken at different time points during the incubation and analyzed by ion chromatography. Furthermore we demonstrated the applicability of the system for studies of microbial activity, using samples from the Isis mud volcano. We could detect an increase in sulfate reduction rate upon the addition of methane to the sample.
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spelling pubmed-32712762012-02-15 A System for Incubations at High Gas Partial Pressure Sauer, Patrick Glombitza, Clemens Kallmeyer, Jens Front Microbiol Microbiology High-pressure is a key feature of deep subsurface environments. High partial pressure of dissolved gasses plays an important role in microbial metabolism, because thermodynamic feasibility of many reactions depends on the concentration of reactants. For gases, this is controlled by their partial pressure, which can exceed 1 MPa at in situ conditions. Therefore, high hydrostatic pressure alone is not sufficient to recreate true deep subsurface in situ conditions, but the partial pressure of dissolved gasses has to be controlled as well. We developed an incubation system that allows for incubations at hydrostatic pressure up to 60 MPa, temperatures up to 120°C, and at high gas partial pressure. The composition and partial pressure of gasses can be manipulated during the experiment. To keep costs low, the system is mainly made from off-the-shelf components with only very few custom-made parts. A flexible and inert PVDF (polyvinylidene fluoride) incubator sleeve, which is almost impermeable for gases, holds the sample and separates it from the pressure fluid. The flexibility of the incubator sleeve allows for sub-sampling of the medium without loss of pressure. Experiments can be run in both static and flow-through mode. The incubation system described here is usable for versatile purposes, not only the incubation of microorganisms and determination of growth rates, but also for chemical degradation or extraction experiments under high gas saturation, e.g., fluid–gas–rock-interactions in relation to carbon dioxide sequestration. As an application of the system we extracted organic compounds from sub-bituminous coal using H(2)O as well as a H(2)O–CO(2) mixture at elevated temperature (90°C) and pressure (5 MPa). Subsamples were taken at different time points during the incubation and analyzed by ion chromatography. Furthermore we demonstrated the applicability of the system for studies of microbial activity, using samples from the Isis mud volcano. We could detect an increase in sulfate reduction rate upon the addition of methane to the sample. Frontiers Research Foundation 2012-02-03 /pmc/articles/PMC3271276/ /pubmed/22347218 http://dx.doi.org/10.3389/fmicb.2012.00025 Text en Copyright © 2012 Sauer, Glombitza and Kallmeyer. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited.
spellingShingle Microbiology
Sauer, Patrick
Glombitza, Clemens
Kallmeyer, Jens
A System for Incubations at High Gas Partial Pressure
title A System for Incubations at High Gas Partial Pressure
title_full A System for Incubations at High Gas Partial Pressure
title_fullStr A System for Incubations at High Gas Partial Pressure
title_full_unstemmed A System for Incubations at High Gas Partial Pressure
title_short A System for Incubations at High Gas Partial Pressure
title_sort system for incubations at high gas partial pressure
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271276/
https://www.ncbi.nlm.nih.gov/pubmed/22347218
http://dx.doi.org/10.3389/fmicb.2012.00025
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