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Bayesian localisation microscopy reveals nanoscale podosome dynamics

We demonstrate a localization microscopy analysis method that is able to extract results in live cells using standard fluorescent proteins and Xenon arc lamp illumination. Our Bayesian analysis of blinking and bleaching (3B analysis) method models the entire dataset simultaneously as being generated...

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Detalles Bibliográficos
Autores principales: Cox, Susan, Rosten, Edward, Monypenny, James, Jovanovic-Talisman, Tijana, Burnette, Dylan T., Lippincott-Schwartz, Jennifer, Jones, Gareth E., Heintzmann, Rainer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3272474/
https://www.ncbi.nlm.nih.gov/pubmed/22138825
http://dx.doi.org/10.1038/nmeth.1812
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author Cox, Susan
Rosten, Edward
Monypenny, James
Jovanovic-Talisman, Tijana
Burnette, Dylan T.
Lippincott-Schwartz, Jennifer
Jones, Gareth E.
Heintzmann, Rainer
author_facet Cox, Susan
Rosten, Edward
Monypenny, James
Jovanovic-Talisman, Tijana
Burnette, Dylan T.
Lippincott-Schwartz, Jennifer
Jones, Gareth E.
Heintzmann, Rainer
author_sort Cox, Susan
collection PubMed
description We demonstrate a localization microscopy analysis method that is able to extract results in live cells using standard fluorescent proteins and Xenon arc lamp illumination. Our Bayesian analysis of blinking and bleaching (3B analysis) method models the entire dataset simultaneously as being generated by a number of fluorophores which may or may not be emitting light at any given time. The resulting technique allows many overlapping fluorophores in each frame, and unifies the analysis of localization from blinking and bleaching events. By modeling the entire dataset we are able to use each reappearance of a fluorophore to improve the localization accuracy. The high performance of this technique allows us to reveal the nanoscale dynamics of podosome formation and dissociation with a resolution of 50 nm on a four second timescale.
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spelling pubmed-32724742012-08-01 Bayesian localisation microscopy reveals nanoscale podosome dynamics Cox, Susan Rosten, Edward Monypenny, James Jovanovic-Talisman, Tijana Burnette, Dylan T. Lippincott-Schwartz, Jennifer Jones, Gareth E. Heintzmann, Rainer Nat Methods Article We demonstrate a localization microscopy analysis method that is able to extract results in live cells using standard fluorescent proteins and Xenon arc lamp illumination. Our Bayesian analysis of blinking and bleaching (3B analysis) method models the entire dataset simultaneously as being generated by a number of fluorophores which may or may not be emitting light at any given time. The resulting technique allows many overlapping fluorophores in each frame, and unifies the analysis of localization from blinking and bleaching events. By modeling the entire dataset we are able to use each reappearance of a fluorophore to improve the localization accuracy. The high performance of this technique allows us to reveal the nanoscale dynamics of podosome formation and dissociation with a resolution of 50 nm on a four second timescale. 2011-12-04 /pmc/articles/PMC3272474/ /pubmed/22138825 http://dx.doi.org/10.1038/nmeth.1812 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Cox, Susan
Rosten, Edward
Monypenny, James
Jovanovic-Talisman, Tijana
Burnette, Dylan T.
Lippincott-Schwartz, Jennifer
Jones, Gareth E.
Heintzmann, Rainer
Bayesian localisation microscopy reveals nanoscale podosome dynamics
title Bayesian localisation microscopy reveals nanoscale podosome dynamics
title_full Bayesian localisation microscopy reveals nanoscale podosome dynamics
title_fullStr Bayesian localisation microscopy reveals nanoscale podosome dynamics
title_full_unstemmed Bayesian localisation microscopy reveals nanoscale podosome dynamics
title_short Bayesian localisation microscopy reveals nanoscale podosome dynamics
title_sort bayesian localisation microscopy reveals nanoscale podosome dynamics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3272474/
https://www.ncbi.nlm.nih.gov/pubmed/22138825
http://dx.doi.org/10.1038/nmeth.1812
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