Cargando…
NTRFinder: a software tool to find nested tandem repeats
We introduce the software tool NTRFinder to search for a complex repetitive structure in DNA we call a nested tandem repeat (NTR). An NTR is a recurrence of two or more distinct tandem motifs interspersed with each other. We propose that NTRs can be used as phylogenetic and population markers. We ha...
Autores principales: | Matroud, Atheer A., Hendy, M. D., Tuffley, C. P. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3273788/ https://www.ncbi.nlm.nih.gov/pubmed/22121222 http://dx.doi.org/10.1093/nar/gkr1070 |
Ejemplares similares
-
Profiling the genome-wide landscape of tandem repeat expansions
por: Mousavi, Nima, et al.
Publicado: (2019) -
Accurate measurement of microsatellite length by disrupting its tandem repeat structure
por: Wang, Zihua, et al.
Publicado: (2022) -
Graph-based modeling of tandem repeats improves global multiple sequence alignment
por: Szalkowski, Adam M., et al.
Publicado: (2013) -
Inferring short tandem repeat variation from paired-end short reads
por: Cao, Minh Duc, et al.
Publicado: (2014) -
Detection of dispersed short tandem repeats using reversible jump Markov chain Monte Carlo
por: Liang, Tong, et al.
Publicado: (2012)