Cargando…

Identification of Amino Acid Propensities That Are Strong Determinants of Linear B-cell Epitope Using Neural Networks

BACKGROUND: Identification of amino acid propensities that are strong determinants of linear B-cell epitope is very important to enrich our knowledge about epitopes. This can also help to obtain better epitope prediction. Typical linear B-cell epitope prediction methods combine various propensities...

Descripción completa

Detalles Bibliográficos
Autores principales:	Su, Chun-Hung, Pal, Nikhil R., Lin, Ken-Li, Chung, I-Fang
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3275595/ https://www.ncbi.nlm.nih.gov/pubmed/22347389 http://dx.doi.org/10.1371/journal.pone.0030617

Ejemplares similares

Correction: Identification of Amino Acid Propensities That Are Strong Determinants of Linear B-cell Epitope Using Neural Networks
por: Su, Chun-Hung, et al.
Publicado: (2012)

Prediction of B-cell Linear Epitopes with a Combination of Support Vector Machine Classification and Amino Acid Propensity Identification
por: Wang, Hsin-Wei, et al.
Publicado: (2011)

Predicting linear B-cell epitopes using amino acid anchoring pair composition
por: Shen, Weike, et al.
Publicado: (2015)

Immunogenic amino acid motifs and linear epitopes of COVID-19 mRNA vaccines
por: Wisnewski, Adam V., et al.
Publicado: (2021)

Identification of linear epitopes on the flagellar proteins of Clostridioides difficile
por: Razim, A., et al.
Publicado: (2021)

Identification of a linear epitope on the capsid protein of classical swine fever virus
por: Zhang, Xin, et al.
Publicado: (2011)

Identification of one critical amino acid that determines a conformational neutralizing epitope in the capsid protein of porcine circovirus type 2
por: Huang, Li P, et al.
Publicado: (2011)

Identification of a novel linear B-cell epitope in porcine deltacoronavirus nucleocapsid protein
por: He, Wei, et al.
Publicado: (2023)

Enterovirus 71 viral capsid protein linear epitopes: Identification and characterization
por: Gao, Fan, et al.
Publicado: (2012)

Identification of Critical Residues of Linear B Cell Epitope on Goodpasture Autoantigen
por: Jia, Xiao-yu, et al.
Publicado: (2015)

Correction: Identification of one critical amino acid that determines a conformational neutralizing epitope in the capsid protein of porcine circovirus type 2
por: Huang, Li P, et al.
Publicado: (2023)

Epitope definition by proteomic similarity analysis: identification of the linear determinant of the anti-Dsg3 MAb 5H10
por: Lucchese, Alberta, et al.
Publicado: (2004)

Prediction of B-cell epitopes using evolutionary information and propensity scales
por: Lin, Scott Yi-Heng, et al.
Publicado: (2013)

Identification of B-Cell Linear Epitopes in the Nucleocapsid (N) Protein B-Cell Linear Epitopes Conserved among the Main SARS-CoV-2 Variants
por: Rodrigues-da-Silva, Rodrigo N., et al.
Publicado: (2023)

Identification of linear human B-cell epitopes of tick-borne encephalitis virus
por: Kuivanen, Suvi, et al.
Publicado: (2014)

Identification of Cytotoxic T Lymphocyte Epitopes on Swine Viruses: Multi-Epitope Design for Universal T Cell Vaccine
por: Liao, Yu-Chieh, et al.
Publicado: (2013)

Position-specific propensities of amino acids in the β-strand
por: Bhattacharjee, Nicholus, et al.
Publicado: (2010)

NetBCE: An Interpretable Deep Neural Network for Accurate Prediction of Linear B-cell Epitopes
por: Xu, Haodong, et al.
Publicado: (2022)

Identification of a novel linear epitope on the NS1 protein of avian influenza virus
por: Wen, Xuexia, et al.
Publicado: (2015)

Identification of immunodominant linear epitopes from SARS-CoV-2 patient plasma
por: Farrera-Soler, Lluc, et al.
Publicado: (2020)

Identification of a Novel Linear B-Cell Epitope on the Nucleocapsid Protein of Porcine Deltacoronavirus
por: Fu, Jiayu, et al.
Publicado: (2020)

Identification of a potential neutralizing linear epitope of hemagglutinin-neuraminidase in Newcastle disease virus
por: Jin, Zhongyuan, et al.
Publicado: (2021)

Linear epitope identification of monoclonal antibodies against the duck Tembusu virus NS1
por: Tan, Hantai, et al.
Publicado: (2023)

EpitopeVec: linear epitope prediction using deep protein sequence embeddings
por: Bahai, Akash, et al.
Publicado: (2021)

Evolution of Amino Acid Propensities under Stability-Mediated Epistasis
por: Youssef, Noor, et al.
Publicado: (2022)

Leishmania infantum Virulence Factor A2 Protein: Linear B-Cell Epitope Mapping and Identification of Three Main Linear B-Cell Epitopes in Vaccinated and Naturally Infected Dogs
por: Campos, Monique Paiva, et al.
Publicado: (2018)

Dissecting Antibodies with Regards to Linear and Conformational Epitopes
por: Forsström, Björn, et al.
Publicado: (2015)

Characterization and specificity of the linear epitope of the enterovirus 71 VP2 protein
por: Kiener, Tanja K, et al.
Publicado: (2012)

Non-linearities in the strong-focusing accelerator
por: Caianiello, E R
Publicado: (1953)

Rapid Identification of Novel Immunodominant Proteins and Characterization of a Specific Linear Epitope of Campylobacter jejuni
por: Hoppe, Sebastian, et al.
Publicado: (2013)

Identification and Validation of a Linear Protective Neutralizing Epitope in the β-Pore Domain of Alpha Toxin
por: Oscherwitz, Jon, et al.
Publicado: (2015)

Identification and characterization of two linear epitope motifs in hepatitis E virus ORF2 protein
por: Wang, Heng, et al.
Publicado: (2017)

iLBE for Computational Identification of Linear B-cell Epitopes by Integrating Sequence and Evolutionary Features
por: Hasan, Md. Mehedi, et al.
Publicado: (2020)

Identification of a neutralizing linear epitope within the VP1 protein of coxsackievirus A10
por: Zhu, Hanyu, et al.
Publicado: (2022)

Computational Design of High-Affinity Epitope Scaffolds by Backbone Grafting of a Linear Epitope
por: Azoitei, Mihai L., et al.
Publicado: (2012)

epitope1D: accurate taxonomy-aware B-cell linear epitope prediction
por: da Silva, Bruna Moreira, et al.
Publicado: (2023)

Corrigendum: Leishmania infantum Virulence Factor A2 Protein: Linear B-Cell Epitope Mapping and Identification of Three Main Linear B-Cell Epitopes in Vaccinated and Naturally Infected Dogs
por: Campos, Monique Paiva, et al.
Publicado: (2018)

Epitope Prediction Assays Combined with Validation Assays Strongly Narrows down Putative Cytotoxic T Lymphocyte Epitopes
por: Ip, Peng Peng, et al.
Publicado: (2015)

Identification and characterization of linear B cell epitopes on the nucleocapsid protein of porcine epidemic diarrhea virus using monoclonal antibodies
por: Wang, Xianwei, et al.
Publicado: (2020)

Phylogenetic inference of changes in amino acid propensities with single-position resolution
por: Klink, Galya V., et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_7ubhd29ni0636u82fpbk3mgtj1