PASSion: a pattern growth algorithm-based pipeline for splice junction detection in paired-end RNA-Seq data

Motivation: RNA-seq is a powerful technology for the study of transcriptome profiles that uses deep-sequencing technologies. Moreover, it may be used for cellular phenotyping and help establishing the etiology of diseases characterized by abnormal splicing patterns. In RNA-Seq, the exact nature of s...

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Detalles Bibliográficos
Autores principales: Zhang, Yanju, Lameijer, Eric-Wubbo, 't Hoen, Peter A. C., Ning, Zemin, Slagboom, P. Eline, Ye, Kai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3278765/
https://www.ncbi.nlm.nih.gov/pubmed/22219203
http://dx.doi.org/10.1093/bioinformatics/btr712

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