Cargando…
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker gene and metagenomic surveys, which continue to reveal novel species at a remarkable rate. Greengenes is a dedicated full-length 16S rRNA gene database that provides users with a curated taxonomy based...
Autores principales: | McDonald, Daniel, Price, Morgan N, Goodrich, Julia, Nawrocki, Eric P, DeSantis, Todd Z, Probst, Alexander, Andersen, Gary L, Knight, Rob, Hugenholtz, Philip |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3280142/ https://www.ncbi.nlm.nih.gov/pubmed/22134646 http://dx.doi.org/10.1038/ismej.2011.139 |
Ejemplares similares
-
SILVA, RDP, Greengenes, NCBI and OTT — how do these taxonomies compare?
por: Balvočiūtė, Monika, et al.
Publicado: (2017) -
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
por: Liu, Zongzhi, et al.
Publicado: (2008) -
On the origin of prokaryotic "species": the taxonomy of halophilic Archaea
por: DasSarma, Priya, et al.
Publicado: (2008) -
Taxonomic annotation errors incorrectly assign the family Pseudoalteromonadaceae to the order Vibrionales in Greengenes: implications for microbial community assessments
por: Lydon, Keri Ann, et al.
Publicado: (2018) -
Physiology, Taxonomy, and Sulfur Metabolism of the Sulfolobales, an Order of Thermoacidophilic Archaea
por: Liu, Li-Jun, et al.
Publicado: (2021)