Geno viewer, a SAM/BAM viewer tool

The ever evolving Next Generation Sequencing technology is calling for new and innovative ways of data processing and visualization. Following a detailed survey of the current needs of researchers and service providers, the authors have developed GenoViewer: a highly user-friendly, easy-to-operate S...

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Detalles Bibliográficos
Autores principales: Laczik, Miklós, Tukacs, Edit, Uzonyi, Béla, Domokos, Bálint, Doma, Zsolt, Kiss, Máté, Horváth, Attila, Batta, Zoltán, Maros-Szabó, Zsuzsanna, Török, Zsolt
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2012
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3282266/
https://www.ncbi.nlm.nih.gov/pubmed/22359445
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author Laczik, Miklós
Tukacs, Edit
Uzonyi, Béla
Domokos, Bálint
Doma, Zsolt
Kiss, Máté
Horváth, Attila
Batta, Zoltán
Maros-Szabó, Zsuzsanna
Török, Zsolt
author_facet Laczik, Miklós
Tukacs, Edit
Uzonyi, Béla
Domokos, Bálint
Doma, Zsolt
Kiss, Máté
Horváth, Attila
Batta, Zoltán
Maros-Szabó, Zsuzsanna
Török, Zsolt
author_sort Laczik, Miklós
collection PubMed
description The ever evolving Next Generation Sequencing technology is calling for new and innovative ways of data processing and visualization. Following a detailed survey of the current needs of researchers and service providers, the authors have developed GenoViewer: a highly user-friendly, easy-to-operate SAM/BAM viewer and aligner tool. GenoViewer enables fast and efficient NGS assembly browsing, analysis and read mapping. It is highly customized, making it suitable for a wide range of NGS related tasks. Due to its relatively simple architecture, it is easy to add specialised visualization functionalities, facilitating further customised data analysis. The software's source code is freely available; it is open for project and task-specific modifications. AVAILABILITY: The database is available for free at http://www.genoviewer.com/
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spelling pubmed-32822662012-02-22 Geno viewer, a SAM/BAM viewer tool Laczik, Miklós Tukacs, Edit Uzonyi, Béla Domokos, Bálint Doma, Zsolt Kiss, Máté Horváth, Attila Batta, Zoltán Maros-Szabó, Zsuzsanna Török, Zsolt Bioinformation Software The ever evolving Next Generation Sequencing technology is calling for new and innovative ways of data processing and visualization. Following a detailed survey of the current needs of researchers and service providers, the authors have developed GenoViewer: a highly user-friendly, easy-to-operate SAM/BAM viewer and aligner tool. GenoViewer enables fast and efficient NGS assembly browsing, analysis and read mapping. It is highly customized, making it suitable for a wide range of NGS related tasks. Due to its relatively simple architecture, it is easy to add specialised visualization functionalities, facilitating further customised data analysis. The software's source code is freely available; it is open for project and task-specific modifications. AVAILABILITY: The database is available for free at http://www.genoviewer.com/ Biomedical Informatics 2012-01-20 /pmc/articles/PMC3282266/ /pubmed/22359445 Text en © 2012 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Software
Laczik, Miklós
Tukacs, Edit
Uzonyi, Béla
Domokos, Bálint
Doma, Zsolt
Kiss, Máté
Horváth, Attila
Batta, Zoltán
Maros-Szabó, Zsuzsanna
Török, Zsolt
Geno viewer, a SAM/BAM viewer tool
title Geno viewer, a SAM/BAM viewer tool
title_full Geno viewer, a SAM/BAM viewer tool
title_fullStr Geno viewer, a SAM/BAM viewer tool
title_full_unstemmed Geno viewer, a SAM/BAM viewer tool
title_short Geno viewer, a SAM/BAM viewer tool
title_sort geno viewer, a sam/bam viewer tool
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3282266/
https://www.ncbi.nlm.nih.gov/pubmed/22359445
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