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LogSpin: a simple, economical and fast method for RNA isolation from infected or healthy plants and other eukaryotic tissues

BACKGROUND: Rapid RNA extraction is commonly performed with commercial kits, which are very expensive and can involve toxic reagents. Most of these kits can be used with healthy plant tissues, but do not produce consistently high-quality RNA from necrotic fungus-infected tissues or fungal mycelium....

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Detalles Bibliográficos
Autores principales: Yaffe, Hila, Buxdorf, Kobi, Shapira, Illil, Ein-Gedi, Shachaf, Moyal-Ben Zvi, Michal, Fridman, Eyal, Moshelion, Menachem, Levy, Maggie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3282632/
https://www.ncbi.nlm.nih.gov/pubmed/22260178
http://dx.doi.org/10.1186/1756-0500-5-45
Descripción
Sumario:BACKGROUND: Rapid RNA extraction is commonly performed with commercial kits, which are very expensive and can involve toxic reagents. Most of these kits can be used with healthy plant tissues, but do not produce consistently high-quality RNA from necrotic fungus-infected tissues or fungal mycelium. FINDINGS: We report on the development of a rapid and relatively inexpensive method for total RNA extraction from plants and fungus-infected tissues, as well as from insects and fungi, based on guanidine hydrochloride buffer and common DNA extraction columns originally used for the extraction and purification of plasmids and cosmids. CONCLUSIONS: The proposed method can be used reproducibly for RNA isolation from a variety of plant species. It can also be used with infected plant tissue and fungal mycelia, which are typically recalcitrant to standard nucleic acid extraction procedures.