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The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members

The Interferon induced transmembrane proteins (IFITM) are a family of transmembrane proteins that is known to inhibit cell invasion of viruses such as HIV-1 and influenza. We show that the IFITM genes are a subfamily in a larger family of transmembrane (TM) proteins that we call Dispanins, which ref...

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Autores principales: Sällman Almén, Markus, Bringeland, Nathalie, Fredriksson, Robert, Schiöth, Helgi B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3282796/
https://www.ncbi.nlm.nih.gov/pubmed/22363774
http://dx.doi.org/10.1371/journal.pone.0031961
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author Sällman Almén, Markus
Bringeland, Nathalie
Fredriksson, Robert
Schiöth, Helgi B.
author_facet Sällman Almén, Markus
Bringeland, Nathalie
Fredriksson, Robert
Schiöth, Helgi B.
author_sort Sällman Almén, Markus
collection PubMed
description The Interferon induced transmembrane proteins (IFITM) are a family of transmembrane proteins that is known to inhibit cell invasion of viruses such as HIV-1 and influenza. We show that the IFITM genes are a subfamily in a larger family of transmembrane (TM) proteins that we call Dispanins, which refers to a common 2TM structure. We mined the Dispanins in 36 eukaryotic species, covering all major eukaryotic groups, and investigated their evolutionary history using Bayesian and maximum likelihood approaches to infer a phylogenetic tree. We identified ten human genes that together with the known IFITM genes form the Dispanin family. We show that the Dispanins first emerged in eukaryotes in a common ancestor of choanoflagellates and metazoa, and that the family later expanded in vertebrates where it forms four subfamilies (A–D). Interestingly, we also find that the family is found in several different phyla of bacteria and propose that it was horizontally transferred to eukaryotes from bacteria in the common ancestor of choanoflagellates and metazoa. The bacterial and eukaryotic sequences have a considerably conserved protein structure. In conclusion, we introduce a novel family, the Dispanins, together with a nomenclature based on the evolutionary origin.
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spelling pubmed-32827962012-02-23 The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members Sällman Almén, Markus Bringeland, Nathalie Fredriksson, Robert Schiöth, Helgi B. PLoS One Research Article The Interferon induced transmembrane proteins (IFITM) are a family of transmembrane proteins that is known to inhibit cell invasion of viruses such as HIV-1 and influenza. We show that the IFITM genes are a subfamily in a larger family of transmembrane (TM) proteins that we call Dispanins, which refers to a common 2TM structure. We mined the Dispanins in 36 eukaryotic species, covering all major eukaryotic groups, and investigated their evolutionary history using Bayesian and maximum likelihood approaches to infer a phylogenetic tree. We identified ten human genes that together with the known IFITM genes form the Dispanin family. We show that the Dispanins first emerged in eukaryotes in a common ancestor of choanoflagellates and metazoa, and that the family later expanded in vertebrates where it forms four subfamilies (A–D). Interestingly, we also find that the family is found in several different phyla of bacteria and propose that it was horizontally transferred to eukaryotes from bacteria in the common ancestor of choanoflagellates and metazoa. The bacterial and eukaryotic sequences have a considerably conserved protein structure. In conclusion, we introduce a novel family, the Dispanins, together with a nomenclature based on the evolutionary origin. Public Library of Science 2012-02-20 /pmc/articles/PMC3282796/ /pubmed/22363774 http://dx.doi.org/10.1371/journal.pone.0031961 Text en Sällman Almén et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sällman Almén, Markus
Bringeland, Nathalie
Fredriksson, Robert
Schiöth, Helgi B.
The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
title The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
title_full The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
title_fullStr The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
title_full_unstemmed The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
title_short The Dispanins: A Novel Gene Family of Ancient Origin That Contains 14 Human Members
title_sort dispanins: a novel gene family of ancient origin that contains 14 human members
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3282796/
https://www.ncbi.nlm.nih.gov/pubmed/22363774
http://dx.doi.org/10.1371/journal.pone.0031961
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