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Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1

BACKGROUND: To date, the use of traditional nucleic acid amplification tests (NAAT) for detection of HIV-1 DNA or RNA has been restricted to laboratory settings due to time, equipment, and technical expertise requirements. The availability of a rapid NAAT with applicability for resource-limited or p...

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Autores principales: Curtis, Kelly A., Rudolph, Donna L., Nejad, Irene, Singleton, Jered, Beddoe, Andy, Weigl, Bernhard, LaBarre, Paul, Owen, S. Michele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3285652/
https://www.ncbi.nlm.nih.gov/pubmed/22384022
http://dx.doi.org/10.1371/journal.pone.0031432
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author Curtis, Kelly A.
Rudolph, Donna L.
Nejad, Irene
Singleton, Jered
Beddoe, Andy
Weigl, Bernhard
LaBarre, Paul
Owen, S. Michele
author_facet Curtis, Kelly A.
Rudolph, Donna L.
Nejad, Irene
Singleton, Jered
Beddoe, Andy
Weigl, Bernhard
LaBarre, Paul
Owen, S. Michele
author_sort Curtis, Kelly A.
collection PubMed
description BACKGROUND: To date, the use of traditional nucleic acid amplification tests (NAAT) for detection of HIV-1 DNA or RNA has been restricted to laboratory settings due to time, equipment, and technical expertise requirements. The availability of a rapid NAAT with applicability for resource-limited or point-of-care (POC) settings would fill a great need in HIV diagnostics, allowing for timely diagnosis or confirmation of infection status, as well as facilitating the diagnosis of acute infection, screening and evaluation of infants born to HIV-infected mothers. Isothermal amplification methods, such as reverse-transcription, loop-mediated isothermal amplification (RT-LAMP), exhibit characteristics that are ideal for POC settings, since they are typically quicker, easier to perform, and allow for integration into low-tech, portable heating devices. METHODOLOGY/SIGNIFICANT FINDINGS: In this study, we evaluated the HIV-1 RT-LAMP assay using portable, non-instrumented nucleic acid amplification (NINA) heating devices that generate heat from the exothermic reaction of calcium oxide and water. The NINA heating devices exhibited stable temperatures throughout the amplification reaction and consistent amplification results between three separate devices and a thermalcycler. The performance of the NINA heaters was validated using whole blood specimens from HIV-1 infected patients. CONCLUSION: The RT-LAMP isothermal amplification method used in conjunction with a chemical heating device provides a portable, rapid and robust NAAT platform that has the potential to facilitate HIV-1 testing in resource-limited settings and POC.
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spelling pubmed-32856522012-03-01 Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1 Curtis, Kelly A. Rudolph, Donna L. Nejad, Irene Singleton, Jered Beddoe, Andy Weigl, Bernhard LaBarre, Paul Owen, S. Michele PLoS One Research Article BACKGROUND: To date, the use of traditional nucleic acid amplification tests (NAAT) for detection of HIV-1 DNA or RNA has been restricted to laboratory settings due to time, equipment, and technical expertise requirements. The availability of a rapid NAAT with applicability for resource-limited or point-of-care (POC) settings would fill a great need in HIV diagnostics, allowing for timely diagnosis or confirmation of infection status, as well as facilitating the diagnosis of acute infection, screening and evaluation of infants born to HIV-infected mothers. Isothermal amplification methods, such as reverse-transcription, loop-mediated isothermal amplification (RT-LAMP), exhibit characteristics that are ideal for POC settings, since they are typically quicker, easier to perform, and allow for integration into low-tech, portable heating devices. METHODOLOGY/SIGNIFICANT FINDINGS: In this study, we evaluated the HIV-1 RT-LAMP assay using portable, non-instrumented nucleic acid amplification (NINA) heating devices that generate heat from the exothermic reaction of calcium oxide and water. The NINA heating devices exhibited stable temperatures throughout the amplification reaction and consistent amplification results between three separate devices and a thermalcycler. The performance of the NINA heaters was validated using whole blood specimens from HIV-1 infected patients. CONCLUSION: The RT-LAMP isothermal amplification method used in conjunction with a chemical heating device provides a portable, rapid and robust NAAT platform that has the potential to facilitate HIV-1 testing in resource-limited settings and POC. Public Library of Science 2012-02-23 /pmc/articles/PMC3285652/ /pubmed/22384022 http://dx.doi.org/10.1371/journal.pone.0031432 Text en This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Research Article
Curtis, Kelly A.
Rudolph, Donna L.
Nejad, Irene
Singleton, Jered
Beddoe, Andy
Weigl, Bernhard
LaBarre, Paul
Owen, S. Michele
Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1
title Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1
title_full Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1
title_fullStr Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1
title_full_unstemmed Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1
title_short Isothermal Amplification Using a Chemical Heating Device for Point-of-Care Detection of HIV-1
title_sort isothermal amplification using a chemical heating device for point-of-care detection of hiv-1
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3285652/
https://www.ncbi.nlm.nih.gov/pubmed/22384022
http://dx.doi.org/10.1371/journal.pone.0031432
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