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Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods

Compressive sensing (CS) has been shown to enable dramatic acceleration of MRI acquisition in some applications. Being an iterative reconstruction technique, CS MRI reconstructions can be more time-consuming than traditional inverse Fourier reconstruction. We have accelerated our CS MRI reconstructi...

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Detalles Bibliográficos
Autores principales: Smith, David S., Gore, John C., Yankeelov, Thomas E., Welch, E. Brian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296267/
https://www.ncbi.nlm.nih.gov/pubmed/22481908
http://dx.doi.org/10.1155/2012/864827
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author Smith, David S.
Gore, John C.
Yankeelov, Thomas E.
Welch, E. Brian
author_facet Smith, David S.
Gore, John C.
Yankeelov, Thomas E.
Welch, E. Brian
author_sort Smith, David S.
collection PubMed
description Compressive sensing (CS) has been shown to enable dramatic acceleration of MRI acquisition in some applications. Being an iterative reconstruction technique, CS MRI reconstructions can be more time-consuming than traditional inverse Fourier reconstruction. We have accelerated our CS MRI reconstruction by factors of up to 27 by using a split Bregman solver combined with a graphics processing unit (GPU) computing platform. The increases in speed we find are similar to those we measure for matrix multiplication on this platform, suggesting that the split Bregman methods parallelize efficiently. We demonstrate that the combination of the rapid convergence of the split Bregman algorithm and the massively parallel strategy of GPU computing can enable real-time CS reconstruction of even acquisition data matrices of dimension 4096(2) or more, depending on available GPU VRAM. Reconstruction of two-dimensional data matrices of dimension 1024(2) and smaller took ~0.3 s or less, showing that this platform also provides very fast iterative reconstruction for small-to-moderate size images.
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spelling pubmed-32962672012-04-05 Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods Smith, David S. Gore, John C. Yankeelov, Thomas E. Welch, E. Brian Int J Biomed Imaging Research Article Compressive sensing (CS) has been shown to enable dramatic acceleration of MRI acquisition in some applications. Being an iterative reconstruction technique, CS MRI reconstructions can be more time-consuming than traditional inverse Fourier reconstruction. We have accelerated our CS MRI reconstruction by factors of up to 27 by using a split Bregman solver combined with a graphics processing unit (GPU) computing platform. The increases in speed we find are similar to those we measure for matrix multiplication on this platform, suggesting that the split Bregman methods parallelize efficiently. We demonstrate that the combination of the rapid convergence of the split Bregman algorithm and the massively parallel strategy of GPU computing can enable real-time CS reconstruction of even acquisition data matrices of dimension 4096(2) or more, depending on available GPU VRAM. Reconstruction of two-dimensional data matrices of dimension 1024(2) and smaller took ~0.3 s or less, showing that this platform also provides very fast iterative reconstruction for small-to-moderate size images. Hindawi Publishing Corporation 2012 2012-02-01 /pmc/articles/PMC3296267/ /pubmed/22481908 http://dx.doi.org/10.1155/2012/864827 Text en Copyright © 2012 David S. Smith et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Smith, David S.
Gore, John C.
Yankeelov, Thomas E.
Welch, E. Brian
Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods
title Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods
title_full Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods
title_fullStr Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods
title_full_unstemmed Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods
title_short Real-Time Compressive Sensing MRI Reconstruction Using GPU Computing and Split Bregman Methods
title_sort real-time compressive sensing mri reconstruction using gpu computing and split bregman methods
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296267/
https://www.ncbi.nlm.nih.gov/pubmed/22481908
http://dx.doi.org/10.1155/2012/864827
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