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Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures

Optical coherence tomography allows for dynamic, three-dimensional (3D+T) imaging of the heart within animal embryos. However, direct 3D+T imaging frame rates remain insufficient for cardiodynamic analysis. Previously, this limitation has been addressed by reconstructing 3D+T representations of the...

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Autores principales: Larina, Irina V., Larin, Kirill V., Dickinson, Mary E., Liebling, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Optical Society of America 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296549/
https://www.ncbi.nlm.nih.gov/pubmed/22435109
http://dx.doi.org/10.1364/BOE.3.000650
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author Larina, Irina V.
Larin, Kirill V.
Dickinson, Mary E.
Liebling, Michael
author_facet Larina, Irina V.
Larin, Kirill V.
Dickinson, Mary E.
Liebling, Michael
author_sort Larina, Irina V.
collection PubMed
description Optical coherence tomography allows for dynamic, three-dimensional (3D+T) imaging of the heart within animal embryos. However, direct 3D+T imaging frame rates remain insufficient for cardiodynamic analysis. Previously, this limitation has been addressed by reconstructing 3D+T representations of the beating heart based on sets of two-dimensional image sequences (2D+T) acquired sequentially at high frame rate and in fixed (and parallel) planes throughout the heart. These methods either require additional hardware to trigger the acquisition of each 2D+T series to the same phase of the cardiac cycle or accumulate registration errors as the slices are synchronized retrospectively by pairs, without a gating signal. Here, we present a sequential turning acquisition and reconstruction (STAR) method for 3D+T imaging of periodically moving structures, which does not require any additional gating signal and is not prone to registration error accumulation. Similarly to other sequential cardiac imaging methods, multiple fast image series are consecutively acquired for different sections but in between acquisitions, the imaging plane is rotated around the center line instead of shifted along the direction perpendicular to the slices. As the central lines of all image-sequences coincide and represent measurements of the same spatial position, they can be used to accurately synchronize all the slices to a single inherent reference signal. We characterized the accuracy of our method on a simulated dynamic phantom and successfully imaged a beating embryonic rat heart. Potentially, this method can be applied for structural or Doppler imaging approaches with any direct space imaging modality such as computed tomography, ultrasound, or light microscopy.
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spelling pubmed-32965492012-03-20 Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures Larina, Irina V. Larin, Kirill V. Dickinson, Mary E. Liebling, Michael Biomed Opt Express Image Processing Optical coherence tomography allows for dynamic, three-dimensional (3D+T) imaging of the heart within animal embryos. However, direct 3D+T imaging frame rates remain insufficient for cardiodynamic analysis. Previously, this limitation has been addressed by reconstructing 3D+T representations of the beating heart based on sets of two-dimensional image sequences (2D+T) acquired sequentially at high frame rate and in fixed (and parallel) planes throughout the heart. These methods either require additional hardware to trigger the acquisition of each 2D+T series to the same phase of the cardiac cycle or accumulate registration errors as the slices are synchronized retrospectively by pairs, without a gating signal. Here, we present a sequential turning acquisition and reconstruction (STAR) method for 3D+T imaging of periodically moving structures, which does not require any additional gating signal and is not prone to registration error accumulation. Similarly to other sequential cardiac imaging methods, multiple fast image series are consecutively acquired for different sections but in between acquisitions, the imaging plane is rotated around the center line instead of shifted along the direction perpendicular to the slices. As the central lines of all image-sequences coincide and represent measurements of the same spatial position, they can be used to accurately synchronize all the slices to a single inherent reference signal. We characterized the accuracy of our method on a simulated dynamic phantom and successfully imaged a beating embryonic rat heart. Potentially, this method can be applied for structural or Doppler imaging approaches with any direct space imaging modality such as computed tomography, ultrasound, or light microscopy. Optical Society of America 2012-02-24 /pmc/articles/PMC3296549/ /pubmed/22435109 http://dx.doi.org/10.1364/BOE.3.000650 Text en © 2012 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially.
spellingShingle Image Processing
Larina, Irina V.
Larin, Kirill V.
Dickinson, Mary E.
Liebling, Michael
Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures
title Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures
title_full Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures
title_fullStr Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures
title_full_unstemmed Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures
title_short Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures
title_sort sequential turning acquisition and reconstruction (star) method for four-dimensional imaging of cyclically moving structures
topic Image Processing
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296549/
https://www.ncbi.nlm.nih.gov/pubmed/22435109
http://dx.doi.org/10.1364/BOE.3.000650
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