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Brain cancer prognosis: independent validation of a clinical bioinformatics approach
Translational and evidence based medicine can take advantage of biotechnology advances that offer a fast growing variety of high-throughput data for screening molecular activities of genomic, transcriptional, post-transcriptional and translational observations. The clinical information hidden in the...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296594/ https://www.ncbi.nlm.nih.gov/pubmed/22297051 http://dx.doi.org/10.1186/2043-9113-2-2 |
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author | Fronza, Raffaele Tramonti, Michele Atchley, William R Nardini, Christine |
author_facet | Fronza, Raffaele Tramonti, Michele Atchley, William R Nardini, Christine |
author_sort | Fronza, Raffaele |
collection | PubMed |
description | Translational and evidence based medicine can take advantage of biotechnology advances that offer a fast growing variety of high-throughput data for screening molecular activities of genomic, transcriptional, post-transcriptional and translational observations. The clinical information hidden in these data can be clarified with clinical bioinformatics approaches. We have recently proposed a method to analyze different layers of high-throughput (omic) data to preserve the emergent properties that appear in the cellular system when all molecular levels are interacting. We show here that this method applied to brain cancer data can uncover properties (i.e. molecules related to protective versus risky features in different types of brain cancers) that have been independently validated as survival markers, with potential important application in clinical practice. |
format | Online Article Text |
id | pubmed-3296594 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-32965942012-03-08 Brain cancer prognosis: independent validation of a clinical bioinformatics approach Fronza, Raffaele Tramonti, Michele Atchley, William R Nardini, Christine J Clin Bioinforma Short Report Translational and evidence based medicine can take advantage of biotechnology advances that offer a fast growing variety of high-throughput data for screening molecular activities of genomic, transcriptional, post-transcriptional and translational observations. The clinical information hidden in these data can be clarified with clinical bioinformatics approaches. We have recently proposed a method to analyze different layers of high-throughput (omic) data to preserve the emergent properties that appear in the cellular system when all molecular levels are interacting. We show here that this method applied to brain cancer data can uncover properties (i.e. molecules related to protective versus risky features in different types of brain cancers) that have been independently validated as survival markers, with potential important application in clinical practice. BioMed Central 2012-02-01 /pmc/articles/PMC3296594/ /pubmed/22297051 http://dx.doi.org/10.1186/2043-9113-2-2 Text en Copyright ©2012 Fronza et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Report Fronza, Raffaele Tramonti, Michele Atchley, William R Nardini, Christine Brain cancer prognosis: independent validation of a clinical bioinformatics approach |
title | Brain cancer prognosis: independent validation of a clinical bioinformatics approach |
title_full | Brain cancer prognosis: independent validation of a clinical bioinformatics approach |
title_fullStr | Brain cancer prognosis: independent validation of a clinical bioinformatics approach |
title_full_unstemmed | Brain cancer prognosis: independent validation of a clinical bioinformatics approach |
title_short | Brain cancer prognosis: independent validation of a clinical bioinformatics approach |
title_sort | brain cancer prognosis: independent validation of a clinical bioinformatics approach |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296594/ https://www.ncbi.nlm.nih.gov/pubmed/22297051 http://dx.doi.org/10.1186/2043-9113-2-2 |
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