Cargando…
graphite - a Bioconductor package to convert pathway topology to gene network
BACKGROUND: Gene set analysis is moving towards considering pathway topology as a crucial feature. Pathway elements are complex entities such as protein complexes, gene family members and chemical compounds. The conversion of pathway topology to a gene/protein networks (where nodes are a simple elem...
Autores principales: | Sales, Gabriele, Calura, Enrica, Cavalieri, Duccio, Romualdi, Chiara |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3296647/ https://www.ncbi.nlm.nih.gov/pubmed/22292714 http://dx.doi.org/10.1186/1471-2105-13-20 |
Ejemplares similares
-
Graphite Web: web tool for gene set analysis exploiting pathway
topology
por: Sales, Gabriele, et al.
Publicado: (2013) -
GSAR: Bioconductor package for Gene Set analysis in R
por: Rahmatallah, Yasir, et al.
Publicado: (2017) -
NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference
por: Bellot, Pau, et al.
Publicado: (2015) -
rrvgo: a Bioconductor package for interpreting lists of Gene Ontology terms
por: Sayols, Sergi
Publicado: (2023) -
miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase
por: Xu, Taosheng, et al.
Publicado: (2018)