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Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma

Diffuse large B-cell lymphoma (DLBCL) is the most common form of human lymphoma. While a number of structural alterations have been associated with the pathogenesis of this malignancy, the full spectrum of genetic lesions that are present in the DLBCL genome, and therefore the identity of dysregulat...

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Autores principales: Pasqualucci, Laura, Trifonov, Vladimir, Fabbri, Giulia, Ma, Jing, Rossi, Davide, Chiarenza, Annalisa, Wells, Victoria A., Grunn, Adina, Messina, Monica, Elliot, Oliver, Chan, Joseph, Bhagat, Govind, Chadburn, Amy, Gaidano, Gianluca, Mullighan, Charles G., Rabadan, Raul, Dalla-Favera, Riccardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3297422/
https://www.ncbi.nlm.nih.gov/pubmed/21804550
http://dx.doi.org/10.1038/ng.892
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author Pasqualucci, Laura
Trifonov, Vladimir
Fabbri, Giulia
Ma, Jing
Rossi, Davide
Chiarenza, Annalisa
Wells, Victoria A.
Grunn, Adina
Messina, Monica
Elliot, Oliver
Chan, Joseph
Bhagat, Govind
Chadburn, Amy
Gaidano, Gianluca
Mullighan, Charles G.
Rabadan, Raul
Dalla-Favera, Riccardo
author_facet Pasqualucci, Laura
Trifonov, Vladimir
Fabbri, Giulia
Ma, Jing
Rossi, Davide
Chiarenza, Annalisa
Wells, Victoria A.
Grunn, Adina
Messina, Monica
Elliot, Oliver
Chan, Joseph
Bhagat, Govind
Chadburn, Amy
Gaidano, Gianluca
Mullighan, Charles G.
Rabadan, Raul
Dalla-Favera, Riccardo
author_sort Pasqualucci, Laura
collection PubMed
description Diffuse large B-cell lymphoma (DLBCL) is the most common form of human lymphoma. While a number of structural alterations have been associated with the pathogenesis of this malignancy, the full spectrum of genetic lesions that are present in the DLBCL genome, and therefore the identity of dysregulated cellular pathways, remains unknown. By combining next-generation sequencing and copy number analysis, we show that the DLBCL coding genome contains on average more than 30 clonally represented gene alterations/case. This analysis also revealed mutations in genes not previously implicated in DLBCL pathogenesis, including those regulating chromatin methylation (MLL2, 24% of cases) and immune recognition by T cells. These results provide initial data on the complexity of the DLBCL coding genome and identify novel dysregulated pathways underlying its pathogenesis.
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spelling pubmed-32974222012-03-08 Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma Pasqualucci, Laura Trifonov, Vladimir Fabbri, Giulia Ma, Jing Rossi, Davide Chiarenza, Annalisa Wells, Victoria A. Grunn, Adina Messina, Monica Elliot, Oliver Chan, Joseph Bhagat, Govind Chadburn, Amy Gaidano, Gianluca Mullighan, Charles G. Rabadan, Raul Dalla-Favera, Riccardo Nat Genet Article Diffuse large B-cell lymphoma (DLBCL) is the most common form of human lymphoma. While a number of structural alterations have been associated with the pathogenesis of this malignancy, the full spectrum of genetic lesions that are present in the DLBCL genome, and therefore the identity of dysregulated cellular pathways, remains unknown. By combining next-generation sequencing and copy number analysis, we show that the DLBCL coding genome contains on average more than 30 clonally represented gene alterations/case. This analysis also revealed mutations in genes not previously implicated in DLBCL pathogenesis, including those regulating chromatin methylation (MLL2, 24% of cases) and immune recognition by T cells. These results provide initial data on the complexity of the DLBCL coding genome and identify novel dysregulated pathways underlying its pathogenesis. 2011-07-31 /pmc/articles/PMC3297422/ /pubmed/21804550 http://dx.doi.org/10.1038/ng.892 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Pasqualucci, Laura
Trifonov, Vladimir
Fabbri, Giulia
Ma, Jing
Rossi, Davide
Chiarenza, Annalisa
Wells, Victoria A.
Grunn, Adina
Messina, Monica
Elliot, Oliver
Chan, Joseph
Bhagat, Govind
Chadburn, Amy
Gaidano, Gianluca
Mullighan, Charles G.
Rabadan, Raul
Dalla-Favera, Riccardo
Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma
title Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma
title_full Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma
title_fullStr Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma
title_full_unstemmed Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma
title_short Analysis of the Coding Genome of Diffuse Large B-Cell Lymphoma
title_sort analysis of the coding genome of diffuse large b-cell lymphoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3297422/
https://www.ncbi.nlm.nih.gov/pubmed/21804550
http://dx.doi.org/10.1038/ng.892
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