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Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs
A novel method for predicting maximum recommended therapeutic dose (MRTD) is presented using quantitative structure property relationships (QSPRs) and artificial neural networks (ANNs). MRTD data of 31 structurally diverse Antiretroviral drugs (ARVs) were collected from FDA MRTD Database or package...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3299291/ https://www.ncbi.nlm.nih.gov/pubmed/22481974 http://dx.doi.org/10.1155/2012/469769 |
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author | Branham, Michael Lee Ross, Edward A. Govender, Thirumala |
author_facet | Branham, Michael Lee Ross, Edward A. Govender, Thirumala |
author_sort | Branham, Michael Lee |
collection | PubMed |
description | A novel method for predicting maximum recommended therapeutic dose (MRTD) is presented using quantitative structure property relationships (QSPRs) and artificial neural networks (ANNs). MRTD data of 31 structurally diverse Antiretroviral drugs (ARVs) were collected from FDA MRTD Database or package inserts. Molecular property descriptors of each compound, that is, molecular mass, aqueous solubility, lipophilicity, biotransformation half life, oxidation half life, and biodegradation probability were calculated from their SMILES codes. A training set (n = 23) was used to construct multiple linear regression and back propagation neural network models. The models were validated using an external test set (n = 8) which demonstrated that MRTD values may be predicted with reasonable accuracy. Model predictability was described by root mean squared errors (RMSEs), Kendall's correlation coefficients (tau), P-values, and Bland Altman plots for method comparisons. MRTD was predicted by a 6-3-1 neural network model (RMSE = 13.67, tau = 0.643, P = 0.035) more accurately than by the multiple linear regression (RMSE = 27.27, tau = 0.714, P = 0.019) model. Both models illustrated a moderate correlation between aqueous solubility of antiretroviral drugs and maximum therapeutic dose. MRTD prediction may assist in the design of safer, more effective treatments for HIV infection. |
format | Online Article Text |
id | pubmed-3299291 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-32992912012-04-05 Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs Branham, Michael Lee Ross, Edward A. Govender, Thirumala Comput Math Methods Med Research Article A novel method for predicting maximum recommended therapeutic dose (MRTD) is presented using quantitative structure property relationships (QSPRs) and artificial neural networks (ANNs). MRTD data of 31 structurally diverse Antiretroviral drugs (ARVs) were collected from FDA MRTD Database or package inserts. Molecular property descriptors of each compound, that is, molecular mass, aqueous solubility, lipophilicity, biotransformation half life, oxidation half life, and biodegradation probability were calculated from their SMILES codes. A training set (n = 23) was used to construct multiple linear regression and back propagation neural network models. The models were validated using an external test set (n = 8) which demonstrated that MRTD values may be predicted with reasonable accuracy. Model predictability was described by root mean squared errors (RMSEs), Kendall's correlation coefficients (tau), P-values, and Bland Altman plots for method comparisons. MRTD was predicted by a 6-3-1 neural network model (RMSE = 13.67, tau = 0.643, P = 0.035) more accurately than by the multiple linear regression (RMSE = 27.27, tau = 0.714, P = 0.019) model. Both models illustrated a moderate correlation between aqueous solubility of antiretroviral drugs and maximum therapeutic dose. MRTD prediction may assist in the design of safer, more effective treatments for HIV infection. Hindawi Publishing Corporation 2012 2012-02-28 /pmc/articles/PMC3299291/ /pubmed/22481974 http://dx.doi.org/10.1155/2012/469769 Text en Copyright © 2012 Michael Lee Branham et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Branham, Michael Lee Ross, Edward A. Govender, Thirumala Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs |
title | Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs |
title_full | Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs |
title_fullStr | Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs |
title_full_unstemmed | Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs |
title_short | Predictive Models for Maximum Recommended Therapeutic Dose of Antiretroviral Drugs |
title_sort | predictive models for maximum recommended therapeutic dose of antiretroviral drugs |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3299291/ https://www.ncbi.nlm.nih.gov/pubmed/22481974 http://dx.doi.org/10.1155/2012/469769 |
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