Cargando…

Bioinformatics Tools for Mass Spectroscopy-Based Metabolomic Data Processing and Analysis

Biological systems are increasingly being studied in a holistic manner, using omics approaches, to provide quantitative and qualitative descriptions of the diverse collection of cellular components. Among the omics approaches, metabolomics, which deals with the quantitative global profiling of small...

Descripción completa

Detalles Bibliográficos
Autores principales:	Sugimoto, Masahiro, Kawakami, Masato, Robert, Martin, Soga, Tomoyoshi, Tomita, Masaru
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Bentham Science Publishers 2012
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3299976/ https://www.ncbi.nlm.nih.gov/pubmed/22438836 http://dx.doi.org/10.2174/157489312799304431

Ejemplares similares

Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles
por: Sugimoto, Masahiro, et al.
Publicado: (2009)

Quality Assessment of Untargeted Analytical Data in a Large-Scale Metabolomic Study
por: Saito, Rintaro, et al.
Publicado: (2021)

MMMDB: Mouse Multiple Tissue Metabolome Database
por: Sugimoto, Masahiro, et al.
Publicado: (2012)

Effect of masticatory stimulation on the quantity and quality of saliva and the salivary metabolomic profile
por: Okuma, Nobuyuki, et al.
Publicado: (2017)

Effect of storage conditions on salivary polyamines quantified via liquid chromatography-mass spectrometry
por: Tomita, Atsumi, et al.
Publicado: (2018)

Time-resolved metabolomics reveals metabolic modulation in rice foliage
por: Sato, Shigeru, et al.
Publicado: (2008)

Metabolomic alterations in human cancer cells by vitamin C-induced oxidative stress
por: Uetaki, Megumi, et al.
Publicado: (2015)

Identification of salivary metabolomic biomarkers for oral cancer screening
por: Ishikawa, Shigeo, et al.
Publicado: (2016)

Visualization of three-way comparisons of omics data
por: Baran, Richard, et al.
Publicado: (2007)

HybGFS: a hybrid method for genome-fingerprint scanning
por: Shinoda, Kosaku, et al.
Publicado: (2006)

Dynamic Simulation and Metabolome Analysis of Long-Term Erythrocyte Storage in Adenine–Guanosine Solution
por: Nishino, Taiko, et al.
Publicado: (2013)

Metabolome Analysis of Erythrocytes from Patients with Chronic Hepatitis C Reveals the Etiology of Ribavirin-Induced Hemolysis
por: Karasawa, Tetsuru, et al.
Publicado: (2013)

Quality Control of Targeted Plasma Lipids in a Large-Scale Cohort Study Using Liquid Chromatography–Tandem Mass Spectrometry
por: Hirayama, Akiyoshi, et al.
Publicado: (2023)

Metabolomic profiling of lung and prostate tumor tissues by capillary electrophoresis time-of-flight mass spectrometry
por: Kami, Kenjiro, et al.
Publicado: (2012)

A Metabolomic-Based Evaluation of the Role of Commensal Microbiota throughout the Gastrointestinal Tract in Mice
por: Yamamoto, Yuri, et al.
Publicado: (2018)

Metabolomic Analysis of Small Extracellular Vesicles Derived from Pancreatic Cancer Cells Cultured under Normoxia and Hypoxia
por: Hayasaka, Ryosuke, et al.
Publicado: (2021)

Comparative Metabolomics of Small Molecules Specifically Expressed in the Dorsal or Ventral Marginal Zones in Vertebrate Gastrula
por: Suzuki, Yukako, et al.
Publicado: (2022)

Urinary Metabolome Analyses of Patients with Acute Kidney Injury Using Capillary Electrophoresis-Mass Spectrometry
por: Saito, Rintaro, et al.
Publicado: (2021)

Metabolomics-based profiles predictive of low bone mass in menopausal women
por: Miyamoto, Takeshi, et al.
Publicado: (2018)

Metabolomic profiling reveals novel biomarkers of alcohol intake and alcohol-induced liver injury in community-dwelling men
por: Harada, Sei, et al.
Publicado: (2015)

Bioinformatics tools for cancer metabolomics
por: Blekherman, Grigoriy, et al.
Publicado: (2011)

Serum Metabolomic Profiles for Human Pancreatic Cancer Discrimination
por: Itoi, Takao, et al.
Publicado: (2017)

Salivary metabolomics with machine learning for colorectal cancer detection
por: Kuwabara, Hiroshi, et al.
Publicado: (2022)

Charged metabolite biomarkers of food intake assessed via plasma metabolomics in a population-based observational study in Japan
por: Shibutami, Eriko, et al.
Publicado: (2021)

Correction: Charged metabolite biomarkers of food intake assessed via plasma metabolomics in a population-based observational study in Japan
por: Shibutami, Eriko, et al.
Publicado: (2021)

A Metabolomic Profile Predictive of New Osteoporosis or Sarcopenia Development
por: Miyamoto, Kana, et al.
Publicado: (2021)

Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data
por: Marco-Ramell, Anna, et al.
Publicado: (2018)

A Yeast Metabolite Extraction Protocol Optimised for Time-Series Analyses
por: Sasidharan, Kalesh, et al.
Publicado: (2012)

Reprogramming of glutamine metabolism via glutamine synthetase silencing induces cisplatin resistance in A2780 ovarian cancer cells
por: Guo, Jing, et al.
Publicado: (2021)

Quantitative and Molecular Similarity Analyses of the Metabolites of Cold- and Hot-Natured Chinese Herbs
por: Guo, Jing, et al.
Publicado: (2021)

Upregulation of Thymidylate Synthase Induces Pemetrexed Resistance in Malignant Pleural Mesothelioma
por: Sato, Yuzo, et al.
Publicado: (2021)

Metabolomic profiling reveals salivary hypotaurine as a potential early detection marker for medication-related osteonecrosis of the jaw
por: Yatsuoka, Wakako, et al.
Publicado: (2019)

MICOP: Maximal information coefficient-based oscillation prediction to detect biological rhythms in proteomics data
por: Iuchi, Hitoshi, et al.
Publicado: (2018)

Urinary Polyamine Biomarker Panels with Machine-Learning Differentiated Colorectal Cancers, Benign Disease, and Healthy Controls
por: Nakajima, Tetsushi, et al.
Publicado: (2018)

Genetic, metabolomic and transcriptomic analyses of the de novo L-cysteine biosynthetic pathway in the enteric protozoan parasite Entamoeba histolytica
por: Jeelani, Ghulam, et al.
Publicado: (2017)

MathDAMP: a package for differential analysis of metabolite profiles
por: Baran, Richard, et al.
Publicado: (2006)

Positive Autoregulation Delays the Expression Phase of Mammalian Clock Gene Per2
por: Ogawa, Yukino, et al.
Publicado: (2011)

Reliability of urinary charged metabolite concentrations in a large-scale cohort study using capillary electrophoresis-mass spectrometry
por: Ishibashi, Yoshiki, et al.
Publicado: (2021)

Effects of 3-styrylchromones on metabolic profiles and cell death in oral squamous cell carcinoma cells
por: Sakagami, Hiroshi, et al.
Publicado: (2015)

A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics
por: Hoffmann, Nils, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_9dh74mstahh401i2dgibqr66g3