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Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
Transcriptional regulatory networks (TRN) control the underlying mechanisms behind cellular functions and they are defined by a set of core transcription factors regulating cascades of peripheral genes. Here we report SPI1, CEBPA, MNDA and IRF8 as core transcription factors of monocyte TRN and demon...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3302774/ https://www.ncbi.nlm.nih.gov/pubmed/22428058 http://dx.doi.org/10.1371/journal.pone.0033474 |
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author | Suzuki, Takahiro Nakano-Ikegaya, Mika Yabukami-Okuda, Haruka de Hoon, Michiel Severin, Jessica Saga-Hatano, Satomi Shin, Jay W. Kubosaki, Atsutaka Simon, Christophe Hasegawa, Yuki Hayashizaki, Yoshihide Suzuki, Harukazu |
author_facet | Suzuki, Takahiro Nakano-Ikegaya, Mika Yabukami-Okuda, Haruka de Hoon, Michiel Severin, Jessica Saga-Hatano, Satomi Shin, Jay W. Kubosaki, Atsutaka Simon, Christophe Hasegawa, Yuki Hayashizaki, Yoshihide Suzuki, Harukazu |
author_sort | Suzuki, Takahiro |
collection | PubMed |
description | Transcriptional regulatory networks (TRN) control the underlying mechanisms behind cellular functions and they are defined by a set of core transcription factors regulating cascades of peripheral genes. Here we report SPI1, CEBPA, MNDA and IRF8 as core transcription factors of monocyte TRN and demonstrate functional inductions of phagocytosis, inflammatory response and chemotaxis activities in human dermal fibroblasts. The Gene Ontology and KEGG pathway analyses also revealed notable representation of genes involved in immune response and endocytosis in fibroblasts. Moreover, monocyte TRN-inducers triggered multiple monocyte-specific genes based on the transcription factor motif response analysis and suggest that complex cellular TRNs are uniquely amenable to elicit cell-specific functions in unrelated cell types. |
format | Online Article Text |
id | pubmed-3302774 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-33027742012-03-16 Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts Suzuki, Takahiro Nakano-Ikegaya, Mika Yabukami-Okuda, Haruka de Hoon, Michiel Severin, Jessica Saga-Hatano, Satomi Shin, Jay W. Kubosaki, Atsutaka Simon, Christophe Hasegawa, Yuki Hayashizaki, Yoshihide Suzuki, Harukazu PLoS One Research Article Transcriptional regulatory networks (TRN) control the underlying mechanisms behind cellular functions and they are defined by a set of core transcription factors regulating cascades of peripheral genes. Here we report SPI1, CEBPA, MNDA and IRF8 as core transcription factors of monocyte TRN and demonstrate functional inductions of phagocytosis, inflammatory response and chemotaxis activities in human dermal fibroblasts. The Gene Ontology and KEGG pathway analyses also revealed notable representation of genes involved in immune response and endocytosis in fibroblasts. Moreover, monocyte TRN-inducers triggered multiple monocyte-specific genes based on the transcription factor motif response analysis and suggest that complex cellular TRNs are uniquely amenable to elicit cell-specific functions in unrelated cell types. Public Library of Science 2012-03-13 /pmc/articles/PMC3302774/ /pubmed/22428058 http://dx.doi.org/10.1371/journal.pone.0033474 Text en Suzuki et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Suzuki, Takahiro Nakano-Ikegaya, Mika Yabukami-Okuda, Haruka de Hoon, Michiel Severin, Jessica Saga-Hatano, Satomi Shin, Jay W. Kubosaki, Atsutaka Simon, Christophe Hasegawa, Yuki Hayashizaki, Yoshihide Suzuki, Harukazu Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts |
title | Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts |
title_full | Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts |
title_fullStr | Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts |
title_full_unstemmed | Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts |
title_short | Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts |
title_sort | reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3302774/ https://www.ncbi.nlm.nih.gov/pubmed/22428058 http://dx.doi.org/10.1371/journal.pone.0033474 |
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