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Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts

Transcriptional regulatory networks (TRN) control the underlying mechanisms behind cellular functions and they are defined by a set of core transcription factors regulating cascades of peripheral genes. Here we report SPI1, CEBPA, MNDA and IRF8 as core transcription factors of monocyte TRN and demon...

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Autores principales: Suzuki, Takahiro, Nakano-Ikegaya, Mika, Yabukami-Okuda, Haruka, de Hoon, Michiel, Severin, Jessica, Saga-Hatano, Satomi, Shin, Jay W., Kubosaki, Atsutaka, Simon, Christophe, Hasegawa, Yuki, Hayashizaki, Yoshihide, Suzuki, Harukazu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3302774/
https://www.ncbi.nlm.nih.gov/pubmed/22428058
http://dx.doi.org/10.1371/journal.pone.0033474
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author Suzuki, Takahiro
Nakano-Ikegaya, Mika
Yabukami-Okuda, Haruka
de Hoon, Michiel
Severin, Jessica
Saga-Hatano, Satomi
Shin, Jay W.
Kubosaki, Atsutaka
Simon, Christophe
Hasegawa, Yuki
Hayashizaki, Yoshihide
Suzuki, Harukazu
author_facet Suzuki, Takahiro
Nakano-Ikegaya, Mika
Yabukami-Okuda, Haruka
de Hoon, Michiel
Severin, Jessica
Saga-Hatano, Satomi
Shin, Jay W.
Kubosaki, Atsutaka
Simon, Christophe
Hasegawa, Yuki
Hayashizaki, Yoshihide
Suzuki, Harukazu
author_sort Suzuki, Takahiro
collection PubMed
description Transcriptional regulatory networks (TRN) control the underlying mechanisms behind cellular functions and they are defined by a set of core transcription factors regulating cascades of peripheral genes. Here we report SPI1, CEBPA, MNDA and IRF8 as core transcription factors of monocyte TRN and demonstrate functional inductions of phagocytosis, inflammatory response and chemotaxis activities in human dermal fibroblasts. The Gene Ontology and KEGG pathway analyses also revealed notable representation of genes involved in immune response and endocytosis in fibroblasts. Moreover, monocyte TRN-inducers triggered multiple monocyte-specific genes based on the transcription factor motif response analysis and suggest that complex cellular TRNs are uniquely amenable to elicit cell-specific functions in unrelated cell types.
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spelling pubmed-33027742012-03-16 Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts Suzuki, Takahiro Nakano-Ikegaya, Mika Yabukami-Okuda, Haruka de Hoon, Michiel Severin, Jessica Saga-Hatano, Satomi Shin, Jay W. Kubosaki, Atsutaka Simon, Christophe Hasegawa, Yuki Hayashizaki, Yoshihide Suzuki, Harukazu PLoS One Research Article Transcriptional regulatory networks (TRN) control the underlying mechanisms behind cellular functions and they are defined by a set of core transcription factors regulating cascades of peripheral genes. Here we report SPI1, CEBPA, MNDA and IRF8 as core transcription factors of monocyte TRN and demonstrate functional inductions of phagocytosis, inflammatory response and chemotaxis activities in human dermal fibroblasts. The Gene Ontology and KEGG pathway analyses also revealed notable representation of genes involved in immune response and endocytosis in fibroblasts. Moreover, monocyte TRN-inducers triggered multiple monocyte-specific genes based on the transcription factor motif response analysis and suggest that complex cellular TRNs are uniquely amenable to elicit cell-specific functions in unrelated cell types. Public Library of Science 2012-03-13 /pmc/articles/PMC3302774/ /pubmed/22428058 http://dx.doi.org/10.1371/journal.pone.0033474 Text en Suzuki et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Suzuki, Takahiro
Nakano-Ikegaya, Mika
Yabukami-Okuda, Haruka
de Hoon, Michiel
Severin, Jessica
Saga-Hatano, Satomi
Shin, Jay W.
Kubosaki, Atsutaka
Simon, Christophe
Hasegawa, Yuki
Hayashizaki, Yoshihide
Suzuki, Harukazu
Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
title Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
title_full Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
title_fullStr Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
title_full_unstemmed Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
title_short Reconstruction of Monocyte Transcriptional Regulatory Network Accompanies Monocytic Functions in Human Fibroblasts
title_sort reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3302774/
https://www.ncbi.nlm.nih.gov/pubmed/22428058
http://dx.doi.org/10.1371/journal.pone.0033474
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