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Estimates of nuclear DNA content in red algal lineages

BACKGROUND AND AIMS: The red algae are an evolutionarily ancient group of predominantly marine organisms with an estimated 6000 species. Consensus higher-level molecular phylogenies support a basal split between the unicellular Cyanidiophytina and morphologically diverse Rhodophytina, the later subp...

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Autores principales: Kapraun, Donald F., Freshwater, D. Wilson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3303098/
https://www.ncbi.nlm.nih.gov/pubmed/22479676
http://dx.doi.org/10.1093/aobpla/pls005
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author Kapraun, Donald F.
Freshwater, D. Wilson
author_facet Kapraun, Donald F.
Freshwater, D. Wilson
author_sort Kapraun, Donald F.
collection PubMed
description BACKGROUND AND AIMS: The red algae are an evolutionarily ancient group of predominantly marine organisms with an estimated 6000 species. Consensus higher-level molecular phylogenies support a basal split between the unicellular Cyanidiophytina and morphologically diverse Rhodophytina, the later subphylum containing most red algal species. The Rhodophytina is divided into six classes, of which five represent early diverging lineages of generally uninucleate species, whose evolutionary relationships are poorly resolved. The remaining species compose the large (27 currently recognized orders), morphologically diverse and typically multinucleate Florideophyceae. Nuclear DNA content estimates have been published for <1 % of the described red algae. The present investigation summarizes the state of our knowledge and expands our coverage of DNA content information from 196 isolates of red algae. METHODOLOGY: The DNA-localizing fluorochrome DAPI (4′,6-diamidino-2-phenylindole) and RBC (chicken erythrocytes) standards were used to estimate 2C values with static microspectrophotometry. PRINCIPAL RESULTS: Nuclear DNA contents are reported for 196 isolates of red algae, almost doubling the number of estimates available for these organisms. Present results also confirm the reported DNA content range of 0.1–2.8 pg, with species of Ceramiales, Nemaliales and Palmariales containing apparently polyploid genomes with 2C = 2.8, 2.3 and 2.8 pg, respectively. CONCLUSIONS: Early diverging red algal lineages are characterized by relatively small 2C DNA contents while a wide range of 2C values is found within the derived Florideophyceae. An overall correlation between phylogenetic placement and 2C DNA content is not apparent; however, genome size data are available for only a small portion of red algae. Current data do support polyploidy and aneuploidy as pervasive features of red algal genome evolution.
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spelling pubmed-33030982012-03-14 Estimates of nuclear DNA content in red algal lineages Kapraun, Donald F. Freshwater, D. Wilson AoB Plants Research Articles BACKGROUND AND AIMS: The red algae are an evolutionarily ancient group of predominantly marine organisms with an estimated 6000 species. Consensus higher-level molecular phylogenies support a basal split between the unicellular Cyanidiophytina and morphologically diverse Rhodophytina, the later subphylum containing most red algal species. The Rhodophytina is divided into six classes, of which five represent early diverging lineages of generally uninucleate species, whose evolutionary relationships are poorly resolved. The remaining species compose the large (27 currently recognized orders), morphologically diverse and typically multinucleate Florideophyceae. Nuclear DNA content estimates have been published for <1 % of the described red algae. The present investigation summarizes the state of our knowledge and expands our coverage of DNA content information from 196 isolates of red algae. METHODOLOGY: The DNA-localizing fluorochrome DAPI (4′,6-diamidino-2-phenylindole) and RBC (chicken erythrocytes) standards were used to estimate 2C values with static microspectrophotometry. PRINCIPAL RESULTS: Nuclear DNA contents are reported for 196 isolates of red algae, almost doubling the number of estimates available for these organisms. Present results also confirm the reported DNA content range of 0.1–2.8 pg, with species of Ceramiales, Nemaliales and Palmariales containing apparently polyploid genomes with 2C = 2.8, 2.3 and 2.8 pg, respectively. CONCLUSIONS: Early diverging red algal lineages are characterized by relatively small 2C DNA contents while a wide range of 2C values is found within the derived Florideophyceae. An overall correlation between phylogenetic placement and 2C DNA content is not apparent; however, genome size data are available for only a small portion of red algae. Current data do support polyploidy and aneuploidy as pervasive features of red algal genome evolution. Oxford University Press 2012 2012-02-10 /pmc/articles/PMC3303098/ /pubmed/22479676 http://dx.doi.org/10.1093/aobpla/pls005 Text en Published by Oxford University Press http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Kapraun, Donald F.
Freshwater, D. Wilson
Estimates of nuclear DNA content in red algal lineages
title Estimates of nuclear DNA content in red algal lineages
title_full Estimates of nuclear DNA content in red algal lineages
title_fullStr Estimates of nuclear DNA content in red algal lineages
title_full_unstemmed Estimates of nuclear DNA content in red algal lineages
title_short Estimates of nuclear DNA content in red algal lineages
title_sort estimates of nuclear dna content in red algal lineages
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3303098/
https://www.ncbi.nlm.nih.gov/pubmed/22479676
http://dx.doi.org/10.1093/aobpla/pls005
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