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Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain
Functional magnetic resonance data acquired in a task-absent condition (“resting state”) require new data analysis techniques that do not depend on an activation model. Here, we propose a new analysis method called Connectivity Concordance Mapping (CCM). The main idea is to assign a label to each vo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Research Foundation
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308143/ https://www.ncbi.nlm.nih.gov/pubmed/22470320 http://dx.doi.org/10.3389/fnsys.2012.00013 |
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author | Lohmann, Gabriele Ovadia-Caro, Smadar Jungehülsing, Gerhard Jan Margulies, Daniel S. Villringer, Arno Turner, Robert |
author_facet | Lohmann, Gabriele Ovadia-Caro, Smadar Jungehülsing, Gerhard Jan Margulies, Daniel S. Villringer, Arno Turner, Robert |
author_sort | Lohmann, Gabriele |
collection | PubMed |
description | Functional magnetic resonance data acquired in a task-absent condition (“resting state”) require new data analysis techniques that do not depend on an activation model. Here, we propose a new analysis method called Connectivity Concordance Mapping (CCM). The main idea is to assign a label to each voxel based on the reproducibility of its whole-brain pattern of connectivity. Specifically, we compute the correlations of time courses of each voxel with every other voxel for each measurement. Voxels whose correlation pattern is consistent across measurements receive high values. The result of a CCM analysis is thus a voxel-wise map of concordance values. Regions of high inter-subject concordance can be assumed to be functionally consistent, and may thus be of specific interest for further analysis. Here we present two fMRI studies to demonstrate the possible applications of the algorithm. The first is a eyes-open/eyes-closed paradigm designed to highlight the potential of the method in a relatively simple domain. The second study is a longitudinal repeated measurement of a patient following stroke. Longitudinal clinical studies such as this may represent the most interesting domain of applications for this algorithm. |
format | Online Article Text |
id | pubmed-3308143 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-33081432012-04-02 Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain Lohmann, Gabriele Ovadia-Caro, Smadar Jungehülsing, Gerhard Jan Margulies, Daniel S. Villringer, Arno Turner, Robert Front Syst Neurosci Neuroscience Functional magnetic resonance data acquired in a task-absent condition (“resting state”) require new data analysis techniques that do not depend on an activation model. Here, we propose a new analysis method called Connectivity Concordance Mapping (CCM). The main idea is to assign a label to each voxel based on the reproducibility of its whole-brain pattern of connectivity. Specifically, we compute the correlations of time courses of each voxel with every other voxel for each measurement. Voxels whose correlation pattern is consistent across measurements receive high values. The result of a CCM analysis is thus a voxel-wise map of concordance values. Regions of high inter-subject concordance can be assumed to be functionally consistent, and may thus be of specific interest for further analysis. Here we present two fMRI studies to demonstrate the possible applications of the algorithm. The first is a eyes-open/eyes-closed paradigm designed to highlight the potential of the method in a relatively simple domain. The second study is a longitudinal repeated measurement of a patient following stroke. Longitudinal clinical studies such as this may represent the most interesting domain of applications for this algorithm. Frontiers Research Foundation 2012-03-20 /pmc/articles/PMC3308143/ /pubmed/22470320 http://dx.doi.org/10.3389/fnsys.2012.00013 Text en Copyright © 2012 Lohmann, Ovadia-Caro, Jungehülsing, Margulies, Villringer and Turner. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited. |
spellingShingle | Neuroscience Lohmann, Gabriele Ovadia-Caro, Smadar Jungehülsing, Gerhard Jan Margulies, Daniel S. Villringer, Arno Turner, Robert Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain |
title | Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain |
title_full | Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain |
title_fullStr | Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain |
title_full_unstemmed | Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain |
title_short | Connectivity Concordance Mapping: A New Tool for Model-Free Analysis of fMRI Data of the Human Brain |
title_sort | connectivity concordance mapping: a new tool for model-free analysis of fmri data of the human brain |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308143/ https://www.ncbi.nlm.nih.gov/pubmed/22470320 http://dx.doi.org/10.3389/fnsys.2012.00013 |
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