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Phenomenological Analysis of ATP Dependence of Motor Proteins

In this study, through phenomenological comparison of the velocity-force data of processive motor proteins, including conventional kinesin, cytoplasmic dynein and myosin V, I found that, the ratio between motor velocities of two different ATP concentrations is almost invariant for any substall, supe...

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Autor principal: Zhang, Yunxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3311630/
https://www.ncbi.nlm.nih.gov/pubmed/22457719
http://dx.doi.org/10.1371/journal.pone.0032717
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author Zhang, Yunxin
author_facet Zhang, Yunxin
author_sort Zhang, Yunxin
collection PubMed
description In this study, through phenomenological comparison of the velocity-force data of processive motor proteins, including conventional kinesin, cytoplasmic dynein and myosin V, I found that, the ratio between motor velocities of two different ATP concentrations is almost invariant for any substall, superstall or negative external loads. Therefore, the velocity of motors can be well approximated by a Michaelis-Menten like formula [Image: see text], with [Image: see text] the step size, and [Image: see text] the external load [Image: see text] dependent rate of one mechanochemical cycle of motor motion in saturated ATP solution. The difference of Michaelis-Menten constant [Image: see text] for substall, superstall and negative external load indicates, the configurations at which ATP molecule can bind to motor heads for these three cases might be different, though the expression of [Image: see text] as a function of [Image: see text] might be unchanged for any external load [Image: see text]. Verifications of this Michaelis-Menten like formula has also been done by fitting to the recent experimental data.
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spelling pubmed-33116302012-03-28 Phenomenological Analysis of ATP Dependence of Motor Proteins Zhang, Yunxin PLoS One Research Article In this study, through phenomenological comparison of the velocity-force data of processive motor proteins, including conventional kinesin, cytoplasmic dynein and myosin V, I found that, the ratio between motor velocities of two different ATP concentrations is almost invariant for any substall, superstall or negative external loads. Therefore, the velocity of motors can be well approximated by a Michaelis-Menten like formula [Image: see text], with [Image: see text] the step size, and [Image: see text] the external load [Image: see text] dependent rate of one mechanochemical cycle of motor motion in saturated ATP solution. The difference of Michaelis-Menten constant [Image: see text] for substall, superstall and negative external load indicates, the configurations at which ATP molecule can bind to motor heads for these three cases might be different, though the expression of [Image: see text] as a function of [Image: see text] might be unchanged for any external load [Image: see text]. Verifications of this Michaelis-Menten like formula has also been done by fitting to the recent experimental data. Public Library of Science 2012-03-23 /pmc/articles/PMC3311630/ /pubmed/22457719 http://dx.doi.org/10.1371/journal.pone.0032717 Text en Yunxin Zhang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zhang, Yunxin
Phenomenological Analysis of ATP Dependence of Motor Proteins
title Phenomenological Analysis of ATP Dependence of Motor Proteins
title_full Phenomenological Analysis of ATP Dependence of Motor Proteins
title_fullStr Phenomenological Analysis of ATP Dependence of Motor Proteins
title_full_unstemmed Phenomenological Analysis of ATP Dependence of Motor Proteins
title_short Phenomenological Analysis of ATP Dependence of Motor Proteins
title_sort phenomenological analysis of atp dependence of motor proteins
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3311630/
https://www.ncbi.nlm.nih.gov/pubmed/22457719
http://dx.doi.org/10.1371/journal.pone.0032717
work_keys_str_mv AT zhangyunxin phenomenologicalanalysisofatpdependenceofmotorproteins