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Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction
Chrysanthemums constitute approximately 30 species of perennial flowering plants, belonging to the family Asteraceae, native to Asia and Northeastern Europe. Chrysanthemum is a natural cosmetic additive extracted from Chinese herb by modern biochemical technology. It has the properties of anti-bacte...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3314876/ https://www.ncbi.nlm.nih.gov/pubmed/22493524 http://dx.doi.org/10.6026/97320630008225 |
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author | Hasan, Saba Prakash, Jyoti Vashishtha, Abhinav Sharma, Agnivesh Srivastava, Kuldeep Sagar, Faizuddin Khan, Nausheen Dwivedi, Keshav Jain, Payal Shukla, Saransh Gupta, Swati Prakash Mishra, Saumya |
author_facet | Hasan, Saba Prakash, Jyoti Vashishtha, Abhinav Sharma, Agnivesh Srivastava, Kuldeep Sagar, Faizuddin Khan, Nausheen Dwivedi, Keshav Jain, Payal Shukla, Saransh Gupta, Swati Prakash Mishra, Saumya |
author_sort | Hasan, Saba |
collection | PubMed |
description | Chrysanthemums constitute approximately 30 species of perennial flowering plants, belonging to the family Asteraceae, native to Asia and Northeastern Europe. Chrysanthemum is a natural cosmetic additive extracted from Chinese herb by modern biochemical technology. It has the properties of anti-bacterial, anti-viral, reducing (detoxification) and anti-inflammation. It possesses antioxidant characteristics, which could assist in minimizing free-radical induced damage. Therefore, it is widely used in skin and hair care products. Chemical composition of this herbal remedy includes kikkanols, sesquiterpenes, flavonoids, various essential oils containing camphor, cineole, sabinol, borneole and other elements that interfere with DNA, causing erroneous or no PCR products. In the present study, testing and modification of various standard protocols for isolation of high-quality DNA from leaf tissues and seeds of C. indicum was done. It was observed that the DNA obtained from seeds and leaf tissues with a modified cetyltrimethylammonium bromide buffer protocol was of good quality, with no colored pigments and contaminants. Also, DNA could be extracted from leaf tissues without using liquid nitrogen. Quality of DNA extracted from seeds was much better as compared to that extracted from leaf tissues. The extracted DNA was successfully amplified by PCR using arbitrary RAPD primers. The same protocol will probably be useful for extraction of high-molecular weight DNA from other plant materials containing large amounts of secondary metabolites and essential oils. |
format | Online Article Text |
id | pubmed-3314876 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-33148762012-04-10 Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction Hasan, Saba Prakash, Jyoti Vashishtha, Abhinav Sharma, Agnivesh Srivastava, Kuldeep Sagar, Faizuddin Khan, Nausheen Dwivedi, Keshav Jain, Payal Shukla, Saransh Gupta, Swati Prakash Mishra, Saumya Bioinformation Hypothesis Chrysanthemums constitute approximately 30 species of perennial flowering plants, belonging to the family Asteraceae, native to Asia and Northeastern Europe. Chrysanthemum is a natural cosmetic additive extracted from Chinese herb by modern biochemical technology. It has the properties of anti-bacterial, anti-viral, reducing (detoxification) and anti-inflammation. It possesses antioxidant characteristics, which could assist in minimizing free-radical induced damage. Therefore, it is widely used in skin and hair care products. Chemical composition of this herbal remedy includes kikkanols, sesquiterpenes, flavonoids, various essential oils containing camphor, cineole, sabinol, borneole and other elements that interfere with DNA, causing erroneous or no PCR products. In the present study, testing and modification of various standard protocols for isolation of high-quality DNA from leaf tissues and seeds of C. indicum was done. It was observed that the DNA obtained from seeds and leaf tissues with a modified cetyltrimethylammonium bromide buffer protocol was of good quality, with no colored pigments and contaminants. Also, DNA could be extracted from leaf tissues without using liquid nitrogen. Quality of DNA extracted from seeds was much better as compared to that extracted from leaf tissues. The extracted DNA was successfully amplified by PCR using arbitrary RAPD primers. The same protocol will probably be useful for extraction of high-molecular weight DNA from other plant materials containing large amounts of secondary metabolites and essential oils. Biomedical Informatics 2012-03-17 /pmc/articles/PMC3314876/ /pubmed/22493524 http://dx.doi.org/10.6026/97320630008225 Text en © 2012 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Hasan, Saba Prakash, Jyoti Vashishtha, Abhinav Sharma, Agnivesh Srivastava, Kuldeep Sagar, Faizuddin Khan, Nausheen Dwivedi, Keshav Jain, Payal Shukla, Saransh Gupta, Swati Prakash Mishra, Saumya Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction |
title | Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction |
title_full | Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction |
title_fullStr | Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction |
title_full_unstemmed | Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction |
title_short | Optimization of DNA extraction from seeds and leaf tissues of Chrysanthemum (Chrysanthemum indicum) for polymerase chain reaction |
title_sort | optimization of dna extraction from seeds and leaf tissues of chrysanthemum (chrysanthemum indicum) for polymerase chain reaction |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3314876/ https://www.ncbi.nlm.nih.gov/pubmed/22493524 http://dx.doi.org/10.6026/97320630008225 |
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