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Distribution of biological databases over lowbandwidth networks

Databases are integral part of bioinformatics and need to be accessed most frequently, thus downloading and updating them on a regular basis is very critical. The establishment of bioinformatics research facility is a challenge for developing countries as they suffer from inherent low-bandwidth and...

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Detalles Bibliográficos
Autores principales: Azam, S Sikander, Zarina, Shamshad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3314880/
https://www.ncbi.nlm.nih.gov/pubmed/22493528
http://dx.doi.org/10.6026/97320630008239
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author Azam, S Sikander
Zarina, Shamshad
author_facet Azam, S Sikander
Zarina, Shamshad
author_sort Azam, S Sikander
collection PubMed
description Databases are integral part of bioinformatics and need to be accessed most frequently, thus downloading and updating them on a regular basis is very critical. The establishment of bioinformatics research facility is a challenge for developing countries as they suffer from inherent low-bandwidth and unreliable internet connections. Therefore, the identification of techniques supporting download and automatic synchronization of large biological database at low bandwidth is of utmost importance. In current study, two protocols (FTP and Bit Torrent) were evaluated and the utility of a BitTorren based peer-to-peer (btP2P) file distribution model for automatic synchronization and distribution of large dataset at our facility in Pakistan have been discussed.
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spelling pubmed-33148802012-04-10 Distribution of biological databases over lowbandwidth networks Azam, S Sikander Zarina, Shamshad Bioinformation Database Databases are integral part of bioinformatics and need to be accessed most frequently, thus downloading and updating them on a regular basis is very critical. The establishment of bioinformatics research facility is a challenge for developing countries as they suffer from inherent low-bandwidth and unreliable internet connections. Therefore, the identification of techniques supporting download and automatic synchronization of large biological database at low bandwidth is of utmost importance. In current study, two protocols (FTP and Bit Torrent) were evaluated and the utility of a BitTorren based peer-to-peer (btP2P) file distribution model for automatic synchronization and distribution of large dataset at our facility in Pakistan have been discussed. Biomedical Informatics 2012-03-17 /pmc/articles/PMC3314880/ /pubmed/22493528 http://dx.doi.org/10.6026/97320630008239 Text en © 2012 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Database
Azam, S Sikander
Zarina, Shamshad
Distribution of biological databases over lowbandwidth networks
title Distribution of biological databases over lowbandwidth networks
title_full Distribution of biological databases over lowbandwidth networks
title_fullStr Distribution of biological databases over lowbandwidth networks
title_full_unstemmed Distribution of biological databases over lowbandwidth networks
title_short Distribution of biological databases over lowbandwidth networks
title_sort distribution of biological databases over lowbandwidth networks
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3314880/
https://www.ncbi.nlm.nih.gov/pubmed/22493528
http://dx.doi.org/10.6026/97320630008239
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