Cargando…

Identification and characterization of the RNA binding surface of the pentatricopeptide repeat protein

The expressions of chloroplast and mitochondria genes are tightly controlled by numerous nuclear-encoded proteins, mainly at the post-transcriptional level. Recent analyses have identified a large, plant-specific family of pentatricopeptide repeat (PPR) motif-containing proteins that are exclusively...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kobayashi, Keiko, Kawabata, Masuyo, Hisano, Keizo, Kazama, Tomohiko, Matsuoka, Ken, Sugita, Mamoru, Nakamura, Takahiro
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2012
Materias:	RNA
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315335/ https://www.ncbi.nlm.nih.gov/pubmed/22127869 http://dx.doi.org/10.1093/nar/gkr1084

Ejemplares similares

Delineation of pentatricopeptide repeat codes for target RNA prediction
por: Yan, Junjie, et al.
Publicado: (2019)

RNA-binding specificity landscapes of designer pentatricopeptide repeat proteins elucidate principles of PPR–RNA interactions
por: Miranda, Rafael G, et al.
Publicado: (2018)

Pentatricopeptide repeat domain protein 1 lowers the levels of mitochondrial leucine tRNAs in cells
por: Rackham, Oliver, et al.
Publicado: (2009)

The pentatricopeptide repeat MTSF1 protein stabilizes the nad4 mRNA in Arabidopsis mitochondria
por: Haïli, Nawel, et al.
Publicado: (2013)

RNase J participates in a pentatricopeptide repeat protein-mediated 5′ end maturation of chloroplast mRNAs
por: Luro, Scott, et al.
Publicado: (2013)

Unexpected functional versatility of the pentatricopeptide repeat proteins PGR3, PPR5 and PPR10
por: Rojas, Margarita, et al.
Publicado: (2018)

A pentatricopeptide repeat protein acts as a site-specificity factor at multiple RNA editing sites with unrelated cis-acting elements in plastids
por: Okuda, Kenji, et al.
Publicado: (2012)

The pentatricopeptide repeat protein MTSF2 stabilizes a nad1 precursor transcript and defines the 3΄ end of its 5΄-half intron
por: Wang, Chuande, et al.
Publicado: (2017)

An Overview of Pentatricopeptide Repeat (PPR) Proteins in the Moss Physcomitrium patens and Their Role in Organellar Gene Expression
por: Sugita, Mamoru
Publicado: (2022)

Elucidation of the RNA Recognition Code for Pentatricopeptide Repeat Proteins Involved in Organelle RNA Editing in Plants
por: Yagi, Yusuke, et al.
Publicado: (2013)

The L motifs of two moss pentatricopeptide repeat proteins are involved in RNA editing but predominantly not in RNA recognition
por: Matsuda, Takuya, et al.
Publicado: (2020)

A fertility restorer gene, Rf4, widely used for hybrid rice breeding encodes a pentatricopeptide repeat protein
por: Kazama, Tomohiko, et al.
Publicado: (2014)

Pentatricopeptide repeat proteins involved in plant organellar RNA editing
por: Yagi, Yusuke, et al.
Publicado: (2013)

Identification of Pentatricopeptide Repeat Proteins in the Model Organism Dictyostelium discoideum
por: Manna, Sam, et al.
Publicado: (2013)

RNA-binding specificity landscape of the pentatricopeptide repeat protein PPR10
por: Miranda, Rafael G., et al.
Publicado: (2017)

Genetic identification of the functional surface for RNA binding by Escherichia coli ProQ
por: Pandey, Smriti, et al.
Publicado: (2020)

Identification and characterization of RNA guanine-quadruplex binding proteins
por: von Hacht, Annekathrin, et al.
Publicado: (2014)

CAG repeats mimic CUG repeats in the misregulation of alternative splicing
por: Mykowska, Agnieszka, et al.
Publicado: (2011)

Identification and characterization of intracellular proteins that bind oligonucleotides with phosphorothioate linkages
por: Liang, Xue-hai, et al.
Publicado: (2015)

Codeine-binding RNA aptamers and rapid determination of their binding constants using a direct coupling surface plasmon resonance assay
por: Win, Maung Nyan, et al.
Publicado: (2006)

An essential pentatricopeptide repeat protein in the apicomplexan remnant chloroplast
por: Hicks, Joanna L., et al.
Publicado: (2019)

Engineering of pentatricopeptide repeat proteins in organellar gene regulation
por: Lee, Kwanuk, et al.
Publicado: (2023)

Identification of clustered organellar short (cos) RNAs and of a conserved family of organellar RNA-binding proteins, the heptatricopeptide repeat proteins, in the malaria parasite
por: Hillebrand, Arne, et al.
Publicado: (2018)

The solution structure of the pentatricopeptide repeat protein PPR10 upon binding atpH RNA
por: Gully, Benjamin S., et al.
Publicado: (2015)

Identification of a signature motif in target mRNAs of RNA-binding protein AUF1
por: Mazan-Mamczarz, Krystyna, et al.
Publicado: (2009)

Insights into anti-termination regulation of the hut operon in Bacillus subtilis: importance of the dual RNA-binding surfaces of HutP
por: Gopinath, Subash C. B., et al.
Publicado: (2008)

Identification of discrete classes of small nucleolar RNA featuring different ends and RNA binding protein dependency
por: Deschamps-Francoeur, Gabrielle, et al.
Publicado: (2014)

Cyclic mismatch binding ligands interact with disease-associated CGG trinucleotide repeats in RNA and suppress their translation
por: Konieczny, Patryk, et al.
Publicado: (2021)

The Pet309 pentatricopeptide repeat motifs mediate efficient binding to the mitochondrial COX1 transcript in yeast
por: Zamudio-Ochoa, Angélica, et al.
Publicado: (2014)

aPPRove: An HMM-Based Method for Accurate Prediction of RNA-Pentatricopeptide Repeat Protein Binding Events
por: Harrison, Thomas, et al.
Publicado: (2016)

Selenite targets eIF4E-binding protein-1 to inhibit translation initiation and induce the assembly of non-canonical stress granules
por: Fujimura, Ken, et al.
Publicado: (2012)

NXF2 is involved in cytoplasmic mRNA dynamics through interactions with motor proteins
por: Takano, Keizo, et al.
Publicado: (2007)

Prevention of cross-talk in conserved regulatory systems: identification of specificity determinants in RNA-binding anti-termination proteins of the BglG family
por: Hübner, Sebastian, et al.
Publicado: (2011)

The Propensity of Pentatricopeptide Repeat Genes to Evolve into Restorers of Cytoplasmic Male Sterility
por: Gaborieau, Lydiane, et al.
Publicado: (2016)

Peculiarities of piRNA-mediated post-transcriptional silencing of Stellate repeats in testes of Drosophila melanogaster
por: Kotelnikov, Roman N., et al.
Publicado: (2009)

Alkbh1 and Tzfp repress a non-repeat piRNA cluster in pachytene spermatocytes
por: Nordstrand, Line M., et al.
Publicado: (2012)

Single-molecule study of the CUG repeat–MBNL1 interaction and its inhibition by small molecules
por: Haghighat Jahromi, Amin, et al.
Publicado: (2013)

Identification of the Rps28 binding motif from yeast Edc3 involved in the autoregulatory feedback loop controlling RPS28B mRNA decay
por: Kolesnikova, Olga, et al.
Publicado: (2013)

Pentatricopeptide repeat poly(A) binding protein KPAF4 stabilizes mitochondrial mRNAs in Trypanosoma brucei
por: Mesitov, Mikhail V., et al.
Publicado: (2019)

Magnesium-binding architectures in RNA crystal structures: validation, binding preferences, classification and motif detection
por: Zheng, Heping, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_ob1ms3csbsacd2eqhcb8ingsaf